Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 AL162727.3-201ENST00000635661 2787 ntBASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 RN7SL818P-201ENST00000485099 259 ntBASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 RN7SL725P-201ENST00000606439 259 ntBASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 KRT8P29-201ENST00000420409 1371 ntBASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF248Q8NDW4 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 AL354877.1-201ENST00000424412 413 ntBASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 AC005730.2-201ENST00000564549 1184 ntBASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 AL133499.1-201ENST00000596207 608 ntBASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 OR10B1P-201ENST00000601666 907 ntBASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 AC026740.1-201ENST00000607068 791 ntBASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 AP003419.4-201ENST00000616071 517 ntBASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 AP001002.3-201ENST00000623482 206 ntBASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 PRSS30P-206ENST00000641773 873 ntBASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF248Q8NDW4 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms