Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
C3orf56Q8N813 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
C3orf56Q8N813 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
C3orf56Q8N813 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
C3orf56Q8N813 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
C3orf56Q8N813 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
C3orf56Q8N813 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
C3orf56Q8N813 AC074138.1-201ENST00000611182 1303 ntBASIC11.83□□□□□ -0.52
C3orf56Q8N813 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
C3orf56Q8N813 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC11.83□□□□□ -0.52
C3orf56Q8N813 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
C3orf56Q8N813 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
C3orf56Q8N813 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
C3orf56Q8N813 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
C3orf56Q8N813 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
C3orf56Q8N813 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
C3orf56Q8N813 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
C3orf56Q8N813 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
C3orf56Q8N813 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
C3orf56Q8N813 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
C3orf56Q8N813 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
C3orf56Q8N813 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
C3orf56Q8N813 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC11.82□□□□□ -0.52
C3orf56Q8N813 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
C3orf56Q8N813 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
C3orf56Q8N813 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
C3orf56Q8N813 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
C3orf56Q8N813 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
C3orf56Q8N813 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC11.82□□□□□ -0.52
C3orf56Q8N813 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC11.82□□□□□ -0.52
C3orf56Q8N813 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
C3orf56Q8N813 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
C3orf56Q8N813 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
C3orf56Q8N813 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
C3orf56Q8N813 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
C3orf56Q8N813 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC11.82□□□□□ -0.52
C3orf56Q8N813 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
C3orf56Q8N813 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
C3orf56Q8N813 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
C3orf56Q8N813 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
C3orf56Q8N813 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
C3orf56Q8N813 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
C3orf56Q8N813 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
C3orf56Q8N813 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
C3orf56Q8N813 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
C3orf56Q8N813 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
C3orf56Q8N813 AP000356.3-201ENST00000382243 753 ntBASIC11.82□□□□□ -0.52
C3orf56Q8N813 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
C3orf56Q8N813 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
C3orf56Q8N813 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC11.82□□□□□ -0.52
C3orf56Q8N813 AL592076.1-201ENST00000424448 303 ntBASIC11.82□□□□□ -0.52
C3orf56Q8N813 AC097065.1-201ENST00000425737 517 ntBASIC11.82□□□□□ -0.52
C3orf56Q8N813 PDIA3P2-201ENST00000428073 158 ntBASIC11.82□□□□□ -0.52
C3orf56Q8N813 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC11.82□□□□□ -0.52
C3orf56Q8N813 AP002803.1-201ENST00000528836 498 ntBASIC11.82□□□□□ -0.52
C3orf56Q8N813 AC242376.1-201ENST00000559033 726 ntBASIC11.82□□□□□ -0.52
C3orf56Q8N813 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC11.82□□□□□ -0.52
C3orf56Q8N813 TPM1-223ENST00000560445 485 ntTSL 3 BASIC11.82□□□□□ -0.52
C3orf56Q8N813 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC11.82□□□□□ -0.52
C3orf56Q8N813 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC11.82□□□□□ -0.52
C3orf56Q8N813 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC11.82□□□□□ -0.52
C3orf56Q8N813 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC11.82□□□□□ -0.52
C3orf56Q8N813 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
C3orf56Q8N813 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC11.82□□□□□ -0.52
C3orf56Q8N813 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC11.82□□□□□ -0.52
C3orf56Q8N813 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC11.82□□□□□ -0.52
C3orf56Q8N813 AC068587.8-201ENST00000641239 219 ntBASIC11.82□□□□□ -0.52
C3orf56Q8N813 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
C3orf56Q8N813 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
C3orf56Q8N813 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
C3orf56Q8N813 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
C3orf56Q8N813 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
C3orf56Q8N813 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
C3orf56Q8N813 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
C3orf56Q8N813 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
C3orf56Q8N813 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
C3orf56Q8N813 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
C3orf56Q8N813 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
C3orf56Q8N813 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC11.82□□□□□ -0.52
C3orf56Q8N813 AL158070.2-201ENST00000623713 1621 ntBASIC11.82□□□□□ -0.52
C3orf56Q8N813 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
C3orf56Q8N813 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
C3orf56Q8N813 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
C3orf56Q8N813 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
C3orf56Q8N813 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
C3orf56Q8N813 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
C3orf56Q8N813 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
C3orf56Q8N813 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
C3orf56Q8N813 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
C3orf56Q8N813 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
C3orf56Q8N813 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC11.81□□□□□ -0.52
C3orf56Q8N813 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC11.81□□□□□ -0.52
C3orf56Q8N813 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
C3orf56Q8N813 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC11.81□□□□□ -0.52
C3orf56Q8N813 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
C3orf56Q8N813 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
C3orf56Q8N813 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
C3orf56Q8N813 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
C3orf56Q8N813 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
C3orf56Q8N813 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms