Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.26□□□□□ -0.13
CCDC116Q8IYX3 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 KRT8P14-201ENST00000414254 1442 ntBASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 AL162726.2-201ENST00000438986 1017 ntBASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 CLUHP6-201ENST00000580789 941 ntBASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 AP000240.1-201ENST00000609910 452 ntBASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 AC023090.2-201ENST00000625182 2110 ntBASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 AC232323.1-201ENST00000540724 2099 ntBASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.25□□□□□ -0.13
CCDC116Q8IYX3 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CCDC116Q8IYX3 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.24□□□□□ -0.13
CCDC116Q8IYX3 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC116Q8IYX3 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC116Q8IYX3 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC116Q8IYX3 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC116Q8IYX3 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC116Q8IYX3 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.24□□□□□ -0.13
CCDC116Q8IYX3 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.24□□□□□ -0.13
CCDC116Q8IYX3 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.24□□□□□ -0.13
CCDC116Q8IYX3 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC116Q8IYX3 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC116Q8IYX3 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC116Q8IYX3 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC116Q8IYX3 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
CCDC116Q8IYX3 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CCDC116Q8IYX3 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC116Q8IYX3 ACKR1-201ENST00000368121 1240 ntBASIC14.24□□□□□ -0.13
CCDC116Q8IYX3 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC116Q8IYX3 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC116Q8IYX3 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CCDC116Q8IYX3 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.24□□□□□ -0.13
CCDC116Q8IYX3 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC116Q8IYX3 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.24□□□□□ -0.13
CCDC116Q8IYX3 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.24□□□□□ -0.13
CCDC116Q8IYX3 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.24□□□□□ -0.13
CCDC116Q8IYX3 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.24□□□□□ -0.13
CCDC116Q8IYX3 AC108718.1-201ENST00000482382 554 ntTSL 4 BASIC14.24□□□□□ -0.13
CCDC116Q8IYX3 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC116Q8IYX3 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC116Q8IYX3 AC022616.1-201ENST00000518688 554 ntBASIC14.24□□□□□ -0.13
CCDC116Q8IYX3 AP001063.1-201ENST00000568332 529 ntBASIC14.24□□□□□ -0.13
CCDC116Q8IYX3 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.24□□□□□ -0.13
CCDC116Q8IYX3 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.24□□□□□ -0.13
CCDC116Q8IYX3 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.24□□□□□ -0.13
CCDC116Q8IYX3 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.24□□□□□ -0.13
CCDC116Q8IYX3 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC14.24□□□□□ -0.13
CCDC116Q8IYX3 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.24□□□□□ -0.13
CCDC116Q8IYX3 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms