Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC099336.1-201ENST00000417053 1171 ntBASIC14.84□□□□□ -0.03
TRIM48Q8IWZ4 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.84□□□□□ -0.03
TRIM48Q8IWZ4 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM48Q8IWZ4 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.84□□□□□ -0.03
TRIM48Q8IWZ4 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.84□□□□□ -0.03
TRIM48Q8IWZ4 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.84□□□□□ -0.03
TRIM48Q8IWZ4 AC023310.1-201ENST00000554836 735 ntBASIC14.84□□□□□ -0.03
TRIM48Q8IWZ4 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.84□□□□□ -0.03
TRIM48Q8IWZ4 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.84□□□□□ -0.03
TRIM48Q8IWZ4 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.84□□□□□ -0.03
TRIM48Q8IWZ4 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM48Q8IWZ4 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM48Q8IWZ4 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM48Q8IWZ4 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM48Q8IWZ4 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM48Q8IWZ4 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM48Q8IWZ4 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM48Q8IWZ4 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM48Q8IWZ4 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
TRIM48Q8IWZ4 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM48Q8IWZ4 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM48Q8IWZ4 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM48Q8IWZ4 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM48Q8IWZ4 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM48Q8IWZ4 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM48Q8IWZ4 AL138709.1-201ENST00000614840 1693 ntBASIC14.84□□□□□ -0.03
TRIM48Q8IWZ4 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TRIM48Q8IWZ4 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
TRIM48Q8IWZ4 TMBIM7P-203ENST00000641617 1718 ntBASIC14.83□□□□□ -0.03
TRIM48Q8IWZ4 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
TRIM48Q8IWZ4 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRIM48Q8IWZ4 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.83□□□□□ -0.03
TRIM48Q8IWZ4 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
TRIM48Q8IWZ4 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.83□□□□□ -0.03
TRIM48Q8IWZ4 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.83□□□□□ -0.03
TRIM48Q8IWZ4 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 GHSR-202ENST00000427970 912 ntBASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 AL590640.2-201ENST00000457038 527 ntBASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 RNA5SP486-201ENST00000515961 83 ntBASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 RN7SL48P-201ENST00000579283 293 ntBASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 SBF1P1-201ENST00000444527 5631 ntBASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM48Q8IWZ4 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 AC012508.2-201ENST00000567613 1472 ntBASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 AL354989.2-201ENST00000435838 1540 ntBASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM48Q8IWZ4 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms