Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC12.16□□□□□ -0.46
VPS13CQ709C8 OR2R1P-201ENST00000441404 914 ntBASIC12.16□□□□□ -0.46
VPS13CQ709C8 AC003686.1-201ENST00000550956 1034 ntBASIC12.16□□□□□ -0.46
VPS13CQ709C8 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13CQ709C8 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.16□□□□□ -0.46
VPS13CQ709C8 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.16□□□□□ -0.46
VPS13CQ709C8 LILRP1-201ENST00000444199 1370 ntBASIC12.16□□□□□ -0.46
VPS13CQ709C8 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13CQ709C8 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
VPS13CQ709C8 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
VPS13CQ709C8 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13CQ709C8 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13CQ709C8 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13CQ709C8 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13CQ709C8 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC12.16□□□□□ -0.46
VPS13CQ709C8 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13CQ709C8 AC006529.1-201ENST00000459978 637 ntBASIC12.16□□□□□ -0.46
VPS13CQ709C8 AC013553.1-201ENST00000560906 267 ntBASIC12.16□□□□□ -0.46
VPS13CQ709C8 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC12.16□□□□□ -0.46
VPS13CQ709C8 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC12.16□□□□□ -0.46
VPS13CQ709C8 AC004686.1-201ENST00000605113 538 ntBASIC12.16□□□□□ -0.46
VPS13CQ709C8 AC006483.2-201ENST00000609813 515 ntBASIC12.16□□□□□ -0.46
VPS13CQ709C8 AC018695.6-201ENST00000614011 534 ntBASIC12.16□□□□□ -0.46
VPS13CQ709C8 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13CQ709C8 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
VPS13CQ709C8 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13CQ709C8 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13CQ709C8 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13CQ709C8 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
VPS13CQ709C8 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13CQ709C8 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.16□□□□□ -0.46
VPS13CQ709C8 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13CQ709C8 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC12.16□□□□□ -0.46
VPS13CQ709C8 MYB-201ENST00000316528 3571 ntTSL 5 BASIC12.16□□□□□ -0.46
VPS13CQ709C8 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13CQ709C8 RN7SL81P-201ENST00000493781 261 ntBASIC12.16□□□□□ -0.46
VPS13CQ709C8 FOXN3-AS2-201ENST00000554071 1262 ntBASIC12.16□□□□□ -0.46
VPS13CQ709C8 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC12.16□□□□□ -0.46
VPS13CQ709C8 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
VPS13CQ709C8 RN7SL665P-201ENST00000578793 300 ntBASIC12.16□□□□□ -0.46
VPS13CQ709C8 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC12.16□□□□□ -0.46
VPS13CQ709C8 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC12.16□□□□□ -0.46
VPS13CQ709C8 AC073592.2-201ENST00000623062 780 ntBASIC12.16□□□□□ -0.46
VPS13CQ709C8 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
VPS13CQ709C8 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC12.15□□□□□ -0.46
VPS13CQ709C8 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC12.15□□□□□ -0.46
VPS13CQ709C8 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC12.15□□□□□ -0.46
VPS13CQ709C8 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VPS13CQ709C8 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.15□□□□□ -0.46
VPS13CQ709C8 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC12.15□□□□□ -0.46
VPS13CQ709C8 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.15□□□□□ -0.46
VPS13CQ709C8 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.15□□□□□ -0.46
VPS13CQ709C8 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
VPS13CQ709C8 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VPS13CQ709C8 NHP2-202ENST00000314397 599 ntTSL 2 BASIC12.15□□□□□ -0.46
VPS13CQ709C8 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
VPS13CQ709C8 GEMIN8P4-201ENST00000380526 729 ntBASIC12.15□□□□□ -0.46
VPS13CQ709C8 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC12.15□□□□□ -0.46
VPS13CQ709C8 CR392039.1-201ENST00000623217 204 ntBASIC12.15□□□□□ -0.46
VPS13CQ709C8 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
VPS13CQ709C8 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
VPS13CQ709C8 AL591122.2-201ENST00000624125 1853 ntBASIC12.15□□□□□ -0.46
VPS13CQ709C8 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
VPS13CQ709C8 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
VPS13CQ709C8 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
VPS13CQ709C8 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
VPS13CQ709C8 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VPS13CQ709C8 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC12.15□□□□□ -0.46
VPS13CQ709C8 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
VPS13CQ709C8 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
VPS13CQ709C8 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
VPS13CQ709C8 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VPS13CQ709C8 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
VPS13CQ709C8 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC12.15□□□□□ -0.46
VPS13CQ709C8 HNRNPA1P58-201ENST00000403629 610 ntBASIC12.15□□□□□ -0.46
VPS13CQ709C8 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
VPS13CQ709C8 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC12.15□□□□□ -0.46
VPS13CQ709C8 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC12.15□□□□□ -0.46
VPS13CQ709C8 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC12.15□□□□□ -0.46
VPS13CQ709C8 PTPN20CP-201ENST00000614090 920 ntBASIC12.15□□□□□ -0.46
VPS13CQ709C8 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.15□□□□□ -0.46
VPS13CQ709C8 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VPS13CQ709C8 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.15□□□□□ -0.46
VPS13CQ709C8 KRT8P28-201ENST00000433288 1390 ntBASIC12.15□□□□□ -0.46
VPS13CQ709C8 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.15□□□□□ -0.46
VPS13CQ709C8 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
VPS13CQ709C8 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
VPS13CQ709C8 ABR-203ENST00000536794 2213 ntTSL 2 BASIC12.15□□□□□ -0.46
VPS13CQ709C8 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
VPS13CQ709C8 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
VPS13CQ709C8 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC12.15□□□□□ -0.47
VPS13CQ709C8 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.15□□□□□ -0.47
VPS13CQ709C8 CTSL-202ENST00000342020 933 ntTSL 2 BASIC12.15□□□□□ -0.47
VPS13CQ709C8 AC106827.1-201ENST00000366454 431 ntBASIC12.15□□□□□ -0.47
VPS13CQ709C8 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
VPS13CQ709C8 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.15□□□□□ -0.47
VPS13CQ709C8 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
VPS13CQ709C8 CHCHD2P9-201ENST00000461726 456 ntBASIC12.15□□□□□ -0.47
VPS13CQ709C8 RNA5SP417-201ENST00000516459 108 ntBASIC12.15□□□□□ -0.47
VPS13CQ709C8 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC12.15□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms