Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 AC127383.1-201ENST00000444697 1800 ntBASIC13.25□□□□□ -0.29
C11orf88Q6PI97 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.25□□□□□ -0.29
C11orf88Q6PI97 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 SPDYE7P-202ENST00000420373 878 ntBASIC13.25□□□□□ -0.29
C11orf88Q6PI97 KRT18P32-201ENST00000424695 1287 ntBASIC13.25□□□□□ -0.29
C11orf88Q6PI97 AC069335.1-201ENST00000489972 472 ntBASIC13.25□□□□□ -0.29
C11orf88Q6PI97 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 AC079140.1-201ENST00000508039 487 ntBASIC13.25□□□□□ -0.29
C11orf88Q6PI97 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 AL135744.1-201ENST00000565098 629 ntBASIC13.25□□□□□ -0.29
C11orf88Q6PI97 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 AC134407.2-201ENST00000625089 1978 ntBASIC13.25□□□□□ -0.29
C11orf88Q6PI97 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.25□□□□□ -0.29
C11orf88Q6PI97 AL359881.3-201ENST00000602640 1721 ntBASIC13.25□□□□□ -0.29
C11orf88Q6PI97 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 AL139400.1-201ENST00000366220 510 ntBASIC13.24□□□□□ -0.29
C11orf88Q6PI97 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
C11orf88Q6PI97 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms