Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.6□□□□□ -0.07
LYSMD4Q5XG99 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
LYSMD4Q5XG99 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
LYSMD4Q5XG99 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD4Q5XG99 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
LYSMD4Q5XG99 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD4Q5XG99 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD4Q5XG99 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
LYSMD4Q5XG99 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD4Q5XG99 CHCHD2P9-201ENST00000461726 456 ntBASIC14.6□□□□□ -0.07
LYSMD4Q5XG99 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD4Q5XG99 AC130709.1-201ENST00000484779 1212 ntBASIC14.6□□□□□ -0.07
LYSMD4Q5XG99 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.6□□□□□ -0.07
LYSMD4Q5XG99 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.6□□□□□ -0.07
LYSMD4Q5XG99 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
LYSMD4Q5XG99 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC14.6□□□□□ -0.07
LYSMD4Q5XG99 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC14.6□□□□□ -0.07
LYSMD4Q5XG99 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC14.6□□□□□ -0.07
LYSMD4Q5XG99 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD4Q5XG99 MIR4649-201ENST00000582839 64 ntBASIC14.6□□□□□ -0.07
LYSMD4Q5XG99 MIR3188-201ENST00000583494 85 ntBASIC14.6□□□□□ -0.07
LYSMD4Q5XG99 AC087392.5-201ENST00000612517 489 ntBASIC14.6□□□□□ -0.07
LYSMD4Q5XG99 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.6□□□□□ -0.07
LYSMD4Q5XG99 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD4Q5XG99 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD4Q5XG99 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD4Q5XG99 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD4Q5XG99 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.6□□□□□ -0.07
LYSMD4Q5XG99 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD4Q5XG99 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD4Q5XG99 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD4Q5XG99 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD4Q5XG99 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD4Q5XG99 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.6□□□□□ -0.07
LYSMD4Q5XG99 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD4Q5XG99 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD4Q5XG99 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
LYSMD4Q5XG99 CYP4F23P-201ENST00000593402 1579 ntBASIC14.6□□□□□ -0.07
LYSMD4Q5XG99 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 PKD1P5-201ENST00000532415 10291 ntBASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 RPL13AP19-201ENST00000434320 584 ntBASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 GCOM2-201ENST00000509133 1104 ntBASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 GMFG-209ENST00000600322 622 ntTSL 5 BASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LYSMD4Q5XG99 AC090616.6-203ENST00000579186 1945 ntBASIC14.58□□□□□ -0.07
LYSMD4Q5XG99 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LYSMD4Q5XG99 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
LYSMD4Q5XG99 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
LYSMD4Q5XG99 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LYSMD4Q5XG99 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.07
LYSMD4Q5XG99 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LYSMD4Q5XG99 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LYSMD4Q5XG99 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.58□□□□□ -0.07
LYSMD4Q5XG99 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LYSMD4Q5XG99 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD4Q5XG99 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
LYSMD4Q5XG99 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
LYSMD4Q5XG99 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LYSMD4Q5XG99 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
LYSMD4Q5XG99 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms