Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
FAM78BQ5VT40 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 AC011474.4-201ENST00000623523 2076 ntBASIC12.04□□□□□ -0.48
FAM78BQ5VT40 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 CD82-202ENST00000342935 967 ntTSL 5 BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 HTR5BP-201ENST00000430851 1154 ntBASIC12.04□□□□□ -0.48
FAM78BQ5VT40 MKNK2P1-201ENST00000437526 628 ntBASIC12.04□□□□□ -0.48
FAM78BQ5VT40 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 NME4-207ENST00000450036 985 ntTSL 3 BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 GATB-205ENST00000508611 605 ntTSL 2 BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 AC004899.2-201ENST00000622993 3860 ntBASIC12.04□□□□□ -0.48
FAM78BQ5VT40 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.04□□□□□ -0.48
FAM78BQ5VT40 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 MST1P2-201ENST00000457982 2291 ntBASIC12.03□□□□□ -0.48
FAM78BQ5VT40 AC012508.2-201ENST00000567613 1472 ntBASIC12.03□□□□□ -0.48
FAM78BQ5VT40 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 AP000347.1-202ENST00000435868 847 ntBASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms