Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
FREM1Q5H8C1 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
FREM1Q5H8C1 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
FREM1Q5H8C1 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
FREM1Q5H8C1 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC13.16□□□□□ -0.3
FREM1Q5H8C1 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
FREM1Q5H8C1 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC13.16□□□□□ -0.3
FREM1Q5H8C1 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
FREM1Q5H8C1 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
FREM1Q5H8C1 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
FREM1Q5H8C1 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FREM1Q5H8C1 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
FREM1Q5H8C1 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
FREM1Q5H8C1 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
FREM1Q5H8C1 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FREM1Q5H8C1 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
FREM1Q5H8C1 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FREM1Q5H8C1 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FREM1Q5H8C1 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.16□□□□□ -0.3
FREM1Q5H8C1 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
FREM1Q5H8C1 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FREM1Q5H8C1 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.16□□□□□ -0.3
FREM1Q5H8C1 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FREM1Q5H8C1 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
FREM1Q5H8C1 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
FREM1Q5H8C1 RPSAP36-202ENST00000494591 1261 ntBASIC13.16□□□□□ -0.3
FREM1Q5H8C1 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
FREM1Q5H8C1 COX5BP1-201ENST00000507622 393 ntBASIC13.16□□□□□ -0.3
FREM1Q5H8C1 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.16□□□□□ -0.3
FREM1Q5H8C1 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.16□□□□□ -0.3
FREM1Q5H8C1 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.16□□□□□ -0.3
FREM1Q5H8C1 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC13.16□□□□□ -0.3
FREM1Q5H8C1 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.16□□□□□ -0.3
FREM1Q5H8C1 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.16□□□□□ -0.3
FREM1Q5H8C1 AL008718.2-201ENST00000609206 1313 ntBASIC13.16□□□□□ -0.3
FREM1Q5H8C1 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
FREM1Q5H8C1 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
FREM1Q5H8C1 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FREM1Q5H8C1 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.16□□□□□ -0.3
FREM1Q5H8C1 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FREM1Q5H8C1 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
FREM1Q5H8C1 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.16□□□□□ -0.3
FREM1Q5H8C1 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.16□□□□□ -0.3
FREM1Q5H8C1 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FREM1Q5H8C1 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
FREM1Q5H8C1 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.16□□□□□ -0.3
FREM1Q5H8C1 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
FREM1Q5H8C1 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 SALL4P5-201ENST00000419001 1760 ntBASIC13.15□□□□□ -0.3
FREM1Q5H8C1 LTF-203ENST00000426532 2494 ntTSL 2 BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 AHCYP2-201ENST00000430630 1300 ntBASIC13.15□□□□□ -0.3
FREM1Q5H8C1 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 SERPINA13P-202ENST00000478994 924 ntBASIC13.15□□□□□ -0.3
FREM1Q5H8C1 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 AC243960.2-201ENST00000600996 747 ntBASIC13.15□□□□□ -0.3
FREM1Q5H8C1 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 FGD5P1-202ENST00000614866 2498 ntBASIC13.15□□□□□ -0.3
FREM1Q5H8C1 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 MTHFR-210ENST00000641407 2387 ntBASIC13.15□□□□□ -0.3
FREM1Q5H8C1 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 AC018735.1-201ENST00000437208 1502 ntBASIC13.15□□□□□ -0.3
FREM1Q5H8C1 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
FREM1Q5H8C1 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms