Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
PCDH1Q08174 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDH1Q08174 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.53□□□□□ -0.08
PCDH1Q08174 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.53□□□□□ -0.08
PCDH1Q08174 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDH1Q08174 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PCDH1Q08174 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PCDH1Q08174 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.53□□□□□ -0.08
PCDH1Q08174 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDH1Q08174 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDH1Q08174 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PCDH1Q08174 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDH1Q08174 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDH1Q08174 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDH1Q08174 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
PCDH1Q08174 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.53□□□□□ -0.08
PCDH1Q08174 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.53□□□□□ -0.08
PCDH1Q08174 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
PCDH1Q08174 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.53□□□□□ -0.08
PCDH1Q08174 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.53□□□□□ -0.08
PCDH1Q08174 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.53□□□□□ -0.08
PCDH1Q08174 TPT1P11-201ENST00000458482 498 ntBASIC14.53□□□□□ -0.08
PCDH1Q08174 KRT18P25-201ENST00000508931 1278 ntBASIC14.53□□□□□ -0.08
PCDH1Q08174 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDH1Q08174 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.53□□□□□ -0.08
PCDH1Q08174 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.53□□□□□ -0.08
PCDH1Q08174 RPSAP52-203ENST00000622976 1023 ntBASIC14.53□□□□□ -0.08
PCDH1Q08174 CU634019.7-201ENST00000624153 1185 ntBASIC14.53□□□□□ -0.08
PCDH1Q08174 FP236241.2-201ENST00000624906 1185 ntBASIC14.53□□□□□ -0.08
PCDH1Q08174 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.53□□□□□ -0.08
PCDH1Q08174 AL033527.5-201ENST00000641382 801 ntBASIC14.53□□□□□ -0.08
PCDH1Q08174 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDH1Q08174 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDH1Q08174 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDH1Q08174 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PCDH1Q08174 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.53□□□□□ -0.08
PCDH1Q08174 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDH1Q08174 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.53□□□□□ -0.08
PCDH1Q08174 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDH1Q08174 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PCDH1Q08174 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.53□□□□□ -0.08
PCDH1Q08174 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDH1Q08174 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PCDH1Q08174 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
PCDH1Q08174 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
PCDH1Q08174 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCDH1Q08174 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCDH1Q08174 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.52□□□□□ -0.08
PCDH1Q08174 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
PCDH1Q08174 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PCDH1Q08174 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.52□□□□□ -0.08
PCDH1Q08174 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.52□□□□□ -0.08
PCDH1Q08174 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDH1Q08174 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCDH1Q08174 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDH1Q08174 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDH1Q08174 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDH1Q08174 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.52□□□□□ -0.09
PCDH1Q08174 CRB3P1-201ENST00000449338 276 ntBASIC14.52□□□□□ -0.09
PCDH1Q08174 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.52□□□□□ -0.09
PCDH1Q08174 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCDH1Q08174 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCDH1Q08174 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
PCDH1Q08174 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.52□□□□□ -0.09
PCDH1Q08174 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.52□□□□□ -0.09
PCDH1Q08174 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
PCDH1Q08174 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
PCDH1Q08174 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCDH1Q08174 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDH1Q08174 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCDH1Q08174 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.52□□□□□ -0.09
PCDH1Q08174 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDH1Q08174 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCDH1Q08174 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.52□□□□□ -0.09
PCDH1Q08174 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
PCDH1Q08174 AC055811.4-201ENST00000624039 1754 ntBASIC14.52□□□□□ -0.09
PCDH1Q08174 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDH1Q08174 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDH1Q08174 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDH1Q08174 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.52□□□□□ -0.09
PCDH1Q08174 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDH1Q08174 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDH1Q08174 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
PCDH1Q08174 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCDH1Q08174 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PCDH1Q08174 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
PCDH1Q08174 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PCDH1Q08174 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDH1Q08174 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PCDH1Q08174 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDH1Q08174 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDH1Q08174 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDH1Q08174 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.51□□□□□ -0.09
PCDH1Q08174 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.51□□□□□ -0.09
PCDH1Q08174 AC104581.4-201ENST00000623126 3052 ntBASIC14.51□□□□□ -0.09
PCDH1Q08174 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDH1Q08174 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDH1Q08174 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.51□□□□□ -0.09
PCDH1Q08174 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
PCDH1Q08174 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms