Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
HSPG2P98160 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC8.94□□□□□ -0.98
HSPG2P98160 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC8.94□□□□□ -0.98
HSPG2P98160 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC8.94□□□□□ -0.98
HSPG2P98160 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC8.94□□□□□ -0.98
HSPG2P98160 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
HSPG2P98160 AC079328.2-201ENST00000561241 3354 ntBASIC8.94□□□□□ -0.98
HSPG2P98160 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
HSPG2P98160 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
HSPG2P98160 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
HSPG2P98160 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC8.94□□□□□ -0.98
HSPG2P98160 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC8.94□□□□□ -0.98
HSPG2P98160 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
HSPG2P98160 CD3G-202ENST00000392883 1179 ntTSL 5 BASIC8.94□□□□□ -0.98
HSPG2P98160 LINC00265-2P-201ENST00000413372 782 ntBASIC8.94□□□□□ -0.98
HSPG2P98160 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC8.94□□□□□ -0.98
HSPG2P98160 AL136084.1-201ENST00000449172 318 ntBASIC8.94□□□□□ -0.98
HSPG2P98160 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC8.94□□□□□ -0.98
HSPG2P98160 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC8.94□□□□□ -0.98
HSPG2P98160 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC8.94□□□□□ -0.98
HSPG2P98160 KRT8P34-201ENST00000577607 1044 ntBASIC8.94□□□□□ -0.98
HSPG2P98160 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC8.94□□□□□ -0.98
HSPG2P98160 AC106782.5-201ENST00000616011 337 ntBASIC8.94□□□□□ -0.98
HSPG2P98160 AC105250.1-201ENST00000509378 2057 ntBASIC8.94□□□□□ -0.98
HSPG2P98160 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
HSPG2P98160 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
HSPG2P98160 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC8.94□□□□□ -0.98
HSPG2P98160 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
HSPG2P98160 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
HSPG2P98160 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
HSPG2P98160 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
HSPG2P98160 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC8.94□□□□□ -0.98
HSPG2P98160 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
HSPG2P98160 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
HSPG2P98160 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
HSPG2P98160 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
HSPG2P98160 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC8.94□□□□□ -0.98
HSPG2P98160 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC8.94□□□□□ -0.98
HSPG2P98160 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
HSPG2P98160 API5-203ENST00000455725 2257 ntTSL 2 BASIC8.94□□□□□ -0.98
HSPG2P98160 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
HSPG2P98160 DPY19L2P4-201ENST00000479881 442 ntBASIC8.94□□□□□ -0.98
HSPG2P98160 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC8.94□□□□□ -0.98
HSPG2P98160 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC8.94□□□□□ -0.98
HSPG2P98160 AC010183.1-201ENST00000552413 559 ntTSL 4 BASIC8.94□□□□□ -0.98
HSPG2P98160 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC8.94□□□□□ -0.98
HSPG2P98160 AC079414.2-201ENST00000567157 1104 ntBASIC8.94□□□□□ -0.98
HSPG2P98160 RN7SL440P-201ENST00000577855 343 ntBASIC8.94□□□□□ -0.98
HSPG2P98160 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC8.94□□□□□ -0.98
HSPG2P98160 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
HSPG2P98160 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
HSPG2P98160 LILRP1-201ENST00000444199 1370 ntBASIC8.94□□□□□ -0.98
HSPG2P98160 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
HSPG2P98160 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC8.94□□□□□ -0.98
HSPG2P98160 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
HSPG2P98160 HMGA1P2-201ENST00000430198 324 ntBASIC8.94□□□□□ -0.98
HSPG2P98160 ASS1P2-201ENST00000439895 1223 ntBASIC8.94□□□□□ -0.98
HSPG2P98160 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC8.94□□□□□ -0.98
HSPG2P98160 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC8.94□□□□□ -0.98
HSPG2P98160 ACY3-202ENST00000529256 933 ntTSL 3 BASIC8.94□□□□□ -0.98
HSPG2P98160 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC8.94□□□□□ -0.98
HSPG2P98160 BOLA3P2-201ENST00000586496 323 ntBASIC8.94□□□□□ -0.98
HSPG2P98160 ACTBP9-201ENST00000587663 1099 ntBASIC8.94□□□□□ -0.98
HSPG2P98160 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC8.94□□□□□ -0.98
HSPG2P98160 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC8.93□□□□□ -0.98
HSPG2P98160 AP003680.1-201ENST00000598970 3660 ntBASIC8.93□□□□□ -0.98
HSPG2P98160 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
HSPG2P98160 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
HSPG2P98160 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC8.93□□□□□ -0.98
HSPG2P98160 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC8.93□□□□□ -0.98
HSPG2P98160 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC8.93□□□□□ -0.98
HSPG2P98160 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC8.93□□□□□ -0.98
HSPG2P98160 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
HSPG2P98160 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
HSPG2P98160 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
HSPG2P98160 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
HSPG2P98160 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC8.93□□□□□ -0.98
HSPG2P98160 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC8.93□□□□□ -0.98
HSPG2P98160 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
HSPG2P98160 AC099328.1-201ENST00000498809 1030 ntBASIC8.93□□□□□ -0.98
HSPG2P98160 AL132994.1-201ENST00000554098 400 ntBASIC8.93□□□□□ -0.98
HSPG2P98160 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC8.93□□□□□ -0.98
HSPG2P98160 RN7SL478P-201ENST00000584358 298 ntBASIC8.93□□□□□ -0.98
HSPG2P98160 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC8.93□□□□□ -0.98
HSPG2P98160 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC8.93□□□□□ -0.98
HSPG2P98160 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
HSPG2P98160 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC8.93□□□□□ -0.98
HSPG2P98160 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
HSPG2P98160 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC8.93□□□□□ -0.98
HSPG2P98160 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
HSPG2P98160 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
HSPG2P98160 FRMD6-AS1-201ENST00000617151 2229 ntBASIC8.93□□□□□ -0.98
HSPG2P98160 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC8.93□□□□□ -0.98
HSPG2P98160 PSAT1P2-201ENST00000426107 972 ntBASIC8.93□□□□□ -0.98
HSPG2P98160 LINC01823-204ENST00000438722 794 ntTSL 3 BASIC8.93□□□□□ -0.98
HSPG2P98160 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC8.93□□□□□ -0.98
HSPG2P98160 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
HSPG2P98160 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC8.93□□□□□ -0.98
HSPG2P98160 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC8.93□□□□□ -0.98
HSPG2P98160 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC8.93□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms