Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SKP1P63208 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SKP1P63208 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SKP1P63208 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SKP1P63208 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SKP1P63208 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.32□□□□□ -0.12
SKP1P63208 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SKP1P63208 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SKP1P63208 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SKP1P63208 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SKP1P63208 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SKP1P63208 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SKP1P63208 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SKP1P63208 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SKP1P63208 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SKP1P63208 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SKP1P63208 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SKP1P63208 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SKP1P63208 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SKP1P63208 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SKP1P63208 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SKP1P63208 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
SKP1P63208 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SKP1P63208 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
SKP1P63208 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SKP1P63208 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SKP1P63208 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
SKP1P63208 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SKP1P63208 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.31□□□□□ -0.12
SKP1P63208 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.31□□□□□ -0.12
SKP1P63208 RPL7P3-201ENST00000441388 714 ntBASIC14.31□□□□□ -0.12
SKP1P63208 ACA64.2-201ENST00000459014 129 ntBASIC14.31□□□□□ -0.12
SKP1P63208 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SKP1P63208 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.31□□□□□ -0.12
SKP1P63208 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.31□□□□□ -0.12
SKP1P63208 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.31□□□□□ -0.12
SKP1P63208 AP000812.2-201ENST00000538934 718 ntBASIC14.31□□□□□ -0.12
SKP1P63208 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.31□□□□□ -0.12
SKP1P63208 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SKP1P63208 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.31□□□□□ -0.12
SKP1P63208 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.31□□□□□ -0.12
SKP1P63208 GNRHR2-203ENST00000581100 1187 ntBASIC14.31□□□□□ -0.12
SKP1P63208 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SKP1P63208 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.31□□□□□ -0.12
SKP1P63208 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SKP1P63208 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
SKP1P63208 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SKP1P63208 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SKP1P63208 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.31□□□□□ -0.12
SKP1P63208 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SKP1P63208 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SKP1P63208 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SKP1P63208 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SKP1P63208 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SKP1P63208 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.31□□□□□ -0.12
SKP1P63208 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SKP1P63208 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SKP1P63208 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SKP1P63208 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SKP1P63208 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.31□□□□□ -0.12
SKP1P63208 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SKP1P63208 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SKP1P63208 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SKP1P63208 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.31□□□□□ -0.12
SKP1P63208 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SKP1P63208 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SKP1P63208 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.3□□□□□ -0.12
SKP1P63208 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SKP1P63208 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SKP1P63208 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SKP1P63208 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SKP1P63208 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SKP1P63208 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SKP1P63208 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SKP1P63208 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.3□□□□□ -0.12
SKP1P63208 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SKP1P63208 GK-202ENST00000378941 458 ntTSL 3 BASIC14.3□□□□□ -0.12
SKP1P63208 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
SKP1P63208 CNN2P8-201ENST00000421872 913 ntBASIC14.3□□□□□ -0.12
SKP1P63208 AC112492.5-201ENST00000421897 457 ntBASIC14.3□□□□□ -0.12
SKP1P63208 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.3□□□□□ -0.12
SKP1P63208 FTLP10-202ENST00000505798 471 ntBASIC14.3□□□□□ -0.12
SKP1P63208 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.3□□□□□ -0.12
SKP1P63208 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.3□□□□□ -0.12
SKP1P63208 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.3□□□□□ -0.12
SKP1P63208 AC023310.1-201ENST00000554836 735 ntBASIC14.3□□□□□ -0.12
SKP1P63208 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.3□□□□□ -0.12
SKP1P63208 AL512343.1-201ENST00000605837 169 ntBASIC14.3□□□□□ -0.12
SKP1P63208 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SKP1P63208 AC133552.6-201ENST00000613406 534 ntBASIC14.3□□□□□ -0.12
SKP1P63208 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.3□□□□□ -0.12
SKP1P63208 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SKP1P63208 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SKP1P63208 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SKP1P63208 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SKP1P63208 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.3□□□□□ -0.12
SKP1P63208 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.3□□□□□ -0.12
SKP1P63208 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.3□□□□□ -0.12
SKP1P63208 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SKP1P63208 AGAP7P-201ENST00000582299 2062 ntBASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms