Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D3P61077 SLBP-205ENST00000488267 987 ntTSL 2 BASIC10.79□□□□□ -0.68
UBE2D3P61077 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC10.79□□□□□ -0.68
UBE2D3P61077 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC10.79□□□□□ -0.68
UBE2D3P61077 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC10.79□□□□□ -0.68
UBE2D3P61077 AC027369.6-201ENST00000525520 931 ntBASIC10.79□□□□□ -0.68
UBE2D3P61077 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC10.79□□□□□ -0.68
UBE2D3P61077 ZNF890P-202ENST00000530367 1156 ntBASIC10.79□□□□□ -0.68
UBE2D3P61077 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D3P61077 AC140878.1-201ENST00000565277 250 ntBASIC10.79□□□□□ -0.68
UBE2D3P61077 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC10.79□□□□□ -0.68
UBE2D3P61077 AC015911.4-201ENST00000588022 1070 ntBASIC10.79□□□□□ -0.68
UBE2D3P61077 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC10.79□□□□□ -0.68
UBE2D3P61077 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC10.79□□□□□ -0.68
UBE2D3P61077 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC10.79□□□□□ -0.68
UBE2D3P61077 AC079781.4-201ENST00000641908 219 ntBASIC10.79□□□□□ -0.68
UBE2D3P61077 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D3P61077 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D3P61077 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC10.79□□□□□ -0.68
UBE2D3P61077 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC10.79□□□□□ -0.68
UBE2D3P61077 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC10.79□□□□□ -0.68
UBE2D3P61077 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D3P61077 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D3P61077 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D3P61077 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D3P61077 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC10.79□□□□□ -0.68
UBE2D3P61077 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D3P61077 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC10.79□□□□□ -0.68
UBE2D3P61077 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC10.79□□□□□ -0.68
UBE2D3P61077 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
UBE2D3P61077 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D3P61077 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D3P61077 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC10.79□□□□□ -0.68
UBE2D3P61077 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
UBE2D3P61077 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D3P61077 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
UBE2D3P61077 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC10.79□□□□□ -0.68
UBE2D3P61077 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2D3P61077 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D3P61077 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC10.78□□□□□ -0.68
UBE2D3P61077 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC10.78□□□□□ -0.68
UBE2D3P61077 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D3P61077 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D3P61077 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC10.78□□□□□ -0.68
UBE2D3P61077 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
UBE2D3P61077 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D3P61077 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC10.78□□□□□ -0.68
UBE2D3P61077 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
UBE2D3P61077 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D3P61077 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC10.78□□□□□ -0.68
UBE2D3P61077 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC10.78□□□□□ -0.68
UBE2D3P61077 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D3P61077 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D3P61077 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D3P61077 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D3P61077 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D3P61077 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
UBE2D3P61077 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
UBE2D3P61077 AL139400.1-201ENST00000366220 510 ntBASIC10.78□□□□□ -0.68
UBE2D3P61077 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC10.78□□□□□ -0.68
UBE2D3P61077 PKIG-203ENST00000372887 769 ntTSL 3 BASIC10.78□□□□□ -0.68
UBE2D3P61077 SYS1-203ENST00000414310 795 ntTSL 3 BASIC10.78□□□□□ -0.68
UBE2D3P61077 AC107890.1-201ENST00000422478 521 ntBASIC10.78□□□□□ -0.68
UBE2D3P61077 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC10.78□□□□□ -0.68
UBE2D3P61077 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D3P61077 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC10.78□□□□□ -0.68
UBE2D3P61077 AC067863.1-201ENST00000494933 530 ntBASIC10.78□□□□□ -0.68
UBE2D3P61077 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC10.78□□□□□ -0.68
UBE2D3P61077 TIMM17BP1-201ENST00000545713 516 ntBASIC10.78□□□□□ -0.68
UBE2D3P61077 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
UBE2D3P61077 CALM1-205ENST00000553542 877 ntTSL 5 BASIC10.78□□□□□ -0.68
UBE2D3P61077 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC10.78□□□□□ -0.68
UBE2D3P61077 AC004449.1-201ENST00000564240 433 ntBASIC10.78□□□□□ -0.68
UBE2D3P61077 SAMD11P1-201ENST00000571429 661 ntBASIC10.78□□□□□ -0.68
UBE2D3P61077 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC10.78□□□□□ -0.68
UBE2D3P61077 5S_rRNA.22-201ENST00000614916 106 ntBASIC10.78□□□□□ -0.68
UBE2D3P61077 AC004461.2-201ENST00000629517 803 ntBASIC10.78□□□□□ -0.68
UBE2D3P61077 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
UBE2D3P61077 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
UBE2D3P61077 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D3P61077 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
UBE2D3P61077 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
UBE2D3P61077 KCP-203ENST00000610776 5108 ntTSL 5 BASIC10.78□□□□□ -0.68
UBE2D3P61077 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D3P61077 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D3P61077 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D3P61077 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC10.78□□□□□ -0.68
UBE2D3P61077 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC10.78□□□□□ -0.68
UBE2D3P61077 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC10.78□□□□□ -0.68
UBE2D3P61077 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
UBE2D3P61077 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D3P61077 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D3P61077 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D3P61077 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC10.78□□□□□ -0.68
UBE2D3P61077 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D3P61077 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC10.78□□□□□ -0.68
UBE2D3P61077 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D3P61077 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D3P61077 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2D3P61077 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms