Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RIPK4P57078 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RIPK4P57078 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RIPK4P57078 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC19.62■□□□□ 0.73
RIPK4P57078 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RIPK4P57078 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RIPK4P57078 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC19.61■□□□□ 0.73
RIPK4P57078 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RIPK4P57078 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RIPK4P57078 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RIPK4P57078 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC19.61■□□□□ 0.73
RIPK4P57078 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RIPK4P57078 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC19.61■□□□□ 0.73
RIPK4P57078 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC19.61■□□□□ 0.73
RIPK4P57078 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
RIPK4P57078 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC19.61■□□□□ 0.73
RIPK4P57078 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC19.61■□□□□ 0.73
RIPK4P57078 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RIPK4P57078 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
RIPK4P57078 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC19.61■□□□□ 0.73
RIPK4P57078 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RIPK4P57078 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RIPK4P57078 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RIPK4P57078 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RIPK4P57078 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
RIPK4P57078 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RIPK4P57078 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RIPK4P57078 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC19.61■□□□□ 0.73
RIPK4P57078 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RIPK4P57078 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC19.61■□□□□ 0.73
RIPK4P57078 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC19.61■□□□□ 0.73
RIPK4P57078 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RIPK4P57078 RNF41-210ENST00000552244 716 ntTSL 3 BASIC19.61■□□□□ 0.73
RIPK4P57078 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC19.61■□□□□ 0.73
RIPK4P57078 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC19.61■□□□□ 0.73
RIPK4P57078 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC19.61■□□□□ 0.73
RIPK4P57078 AC002472.3-201ENST00000640124 621 ntBASIC19.61■□□□□ 0.73
RIPK4P57078 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC19.61■□□□□ 0.73
RIPK4P57078 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RIPK4P57078 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RIPK4P57078 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RIPK4P57078 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RIPK4P57078 FGD5P1-202ENST00000614866 2498 ntBASIC19.61■□□□□ 0.73
RIPK4P57078 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RIPK4P57078 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RIPK4P57078 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RIPK4P57078 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RIPK4P57078 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RIPK4P57078 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
RIPK4P57078 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RIPK4P57078 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC19.6■□□□□ 0.73
RIPK4P57078 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RIPK4P57078 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RIPK4P57078 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC19.6■□□□□ 0.73
RIPK4P57078 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC19.6■□□□□ 0.73
RIPK4P57078 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RIPK4P57078 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC19.6■□□□□ 0.73
RIPK4P57078 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RIPK4P57078 USP35-204ENST00000530267 2419 ntTSL 2 BASIC19.6■□□□□ 0.73
RIPK4P57078 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC19.6■□□□□ 0.73
RIPK4P57078 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RIPK4P57078 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC19.6■□□□□ 0.73
RIPK4P57078 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RIPK4P57078 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RIPK4P57078 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RIPK4P57078 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC19.6■□□□□ 0.73
RIPK4P57078 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RIPK4P57078 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RIPK4P57078 ACTBP11-201ENST00000436287 1126 ntBASIC19.6■□□□□ 0.73
RIPK4P57078 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC19.6■□□□□ 0.73
RIPK4P57078 RPSAP36-202ENST00000494591 1261 ntBASIC19.6■□□□□ 0.73
RIPK4P57078 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RIPK4P57078 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RIPK4P57078 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RIPK4P57078 AC100850.1-201ENST00000506768 649 ntBASIC19.6■□□□□ 0.73
RIPK4P57078 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RIPK4P57078 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC19.6■□□□□ 0.73
RIPK4P57078 KLK3-211ENST00000597483 810 ntTSL 2 BASIC19.6■□□□□ 0.73
RIPK4P57078 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC19.6■□□□□ 0.73
RIPK4P57078 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
RIPK4P57078 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RIPK4P57078 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC19.6■□□□□ 0.73
RIPK4P57078 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RIPK4P57078 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC19.6■□□□□ 0.73
RIPK4P57078 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RIPK4P57078 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RIPK4P57078 AC015818.8-201ENST00000587907 1519 ntBASIC19.6■□□□□ 0.73
RIPK4P57078 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RIPK4P57078 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RIPK4P57078 AC007292.2-201ENST00000593524 1812 ntBASIC19.6■□□□□ 0.73
RIPK4P57078 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
RIPK4P57078 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RIPK4P57078 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RIPK4P57078 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC19.59■□□□□ 0.73
RIPK4P57078 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RIPK4P57078 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC19.59■□□□□ 0.73
RIPK4P57078 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RIPK4P57078 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RIPK4P57078 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RIPK4P57078 FAM86MP-201ENST00000340703 885 ntBASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms