Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 AC123567.1-201ENST00000548294 1261 ntBASIC14.23□□□□□ -0.13
WNT3P56703 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.23□□□□□ -0.13
WNT3P56703 AC124283.3-201ENST00000570869 594 ntBASIC14.23□□□□□ -0.13
WNT3P56703 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.23□□□□□ -0.13
WNT3P56703 CTBP2P3-201ENST00000585629 1255 ntBASIC14.23□□□□□ -0.13
WNT3P56703 AC099568.2-201ENST00000609194 695 ntBASIC14.23□□□□□ -0.13
WNT3P56703 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
WNT3P56703 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
WNT3P56703 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
WNT3P56703 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
WNT3P56703 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
WNT3P56703 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
WNT3P56703 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.23□□□□□ -0.13
WNT3P56703 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
WNT3P56703 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
WNT3P56703 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
WNT3P56703 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
WNT3P56703 KRT8P22-201ENST00000562317 1415 ntBASIC14.23□□□□□ -0.13
WNT3P56703 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
WNT3P56703 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
WNT3P56703 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
WNT3P56703 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.23□□□□□ -0.13
WNT3P56703 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.22□□□□□ -0.13
WNT3P56703 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.22□□□□□ -0.13
WNT3P56703 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
WNT3P56703 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
WNT3P56703 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
WNT3P56703 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
WNT3P56703 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
WNT3P56703 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.22□□□□□ -0.13
WNT3P56703 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
WNT3P56703 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
WNT3P56703 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
WNT3P56703 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.22□□□□□ -0.13
WNT3P56703 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
WNT3P56703 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.22□□□□□ -0.13
WNT3P56703 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
WNT3P56703 AC063926.3-201ENST00000624734 5658 ntBASIC14.22□□□□□ -0.13
WNT3P56703 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.22□□□□□ -0.13
WNT3P56703 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
WNT3P56703 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
WNT3P56703 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
WNT3P56703 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
WNT3P56703 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.22□□□□□ -0.13
WNT3P56703 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
WNT3P56703 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
WNT3P56703 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.22□□□□□ -0.13
WNT3P56703 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.22□□□□□ -0.13
WNT3P56703 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.22□□□□□ -0.13
WNT3P56703 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
WNT3P56703 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
WNT3P56703 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
WNT3P56703 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.22□□□□□ -0.13
WNT3P56703 AP006294.1-201ENST00000415407 339 ntBASIC14.22□□□□□ -0.13
WNT3P56703 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.22□□□□□ -0.13
WNT3P56703 AC134915.1-201ENST00000426461 574 ntBASIC14.22□□□□□ -0.13
WNT3P56703 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
WNT3P56703 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.22□□□□□ -0.13
WNT3P56703 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
WNT3P56703 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.22□□□□□ -0.13
WNT3P56703 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
WNT3P56703 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
WNT3P56703 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
WNT3P56703 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
WNT3P56703 CR383656.12-201ENST00000549567 513 ntBASIC14.22□□□□□ -0.13
WNT3P56703 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
WNT3P56703 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.22□□□□□ -0.13
WNT3P56703 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.22□□□□□ -0.13
WNT3P56703 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.22□□□□□ -0.13
WNT3P56703 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
WNT3P56703 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.22□□□□□ -0.13
WNT3P56703 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
WNT3P56703 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
WNT3P56703 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
WNT3P56703 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
WNT3P56703 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.22□□□□□ -0.13
WNT3P56703 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.22□□□□□ -0.13
WNT3P56703 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
WNT3P56703 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
WNT3P56703 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
WNT3P56703 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
WNT3P56703 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
WNT3P56703 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
WNT3P56703 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
WNT3P56703 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
WNT3P56703 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
WNT3P56703 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
WNT3P56703 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.22□□□□□ -0.13
WNT3P56703 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
WNT3P56703 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
WNT3P56703 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
WNT3P56703 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
WNT3P56703 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
WNT3P56703 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
WNT3P56703 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.21□□□□□ -0.13
WNT3P56703 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.21□□□□□ -0.13
WNT3P56703 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
WNT3P56703 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
WNT3P56703 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
WNT3P56703 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms