Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
BRPF1P55201 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
BRPF1P55201 MYB-242ENST00000618728 3545 ntTSL 5 BASIC19.1■□□□□ 0.65
BRPF1P55201 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC19.1■□□□□ 0.65
BRPF1P55201 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC19.1■□□□□ 0.65
BRPF1P55201 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
BRPF1P55201 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
BRPF1P55201 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
BRPF1P55201 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC19.1■□□□□ 0.65
BRPF1P55201 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
BRPF1P55201 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
BRPF1P55201 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC19.09■□□□□ 0.65
BRPF1P55201 CASK-202ENST00000378158 3848 ntTSL 5 BASIC19.09■□□□□ 0.65
BRPF1P55201 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
BRPF1P55201 FKBP4P6-201ENST00000457486 1332 ntBASIC19.09■□□□□ 0.65
BRPF1P55201 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
BRPF1P55201 TPM3P8-201ENST00000330554 643 ntBASIC19.09■□□□□ 0.65
BRPF1P55201 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC19.09■□□□□ 0.65
BRPF1P55201 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC19.09■□□□□ 0.65
BRPF1P55201 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
BRPF1P55201 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BRPF1P55201 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
BRPF1P55201 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC19.09■□□□□ 0.65
BRPF1P55201 RPL7P3-201ENST00000441388 714 ntBASIC19.09■□□□□ 0.65
BRPF1P55201 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC19.09■□□□□ 0.65
BRPF1P55201 RPL8-205ENST00000527914 551 ntTSL 3 BASIC19.09■□□□□ 0.65
BRPF1P55201 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BRPF1P55201 ECM1P1-201ENST00000604092 1279 ntBASIC19.09■□□□□ 0.65
BRPF1P55201 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC19.09■□□□□ 0.65
BRPF1P55201 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
BRPF1P55201 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC19.09■□□□□ 0.65
BRPF1P55201 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
BRPF1P55201 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
BRPF1P55201 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
BRPF1P55201 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BRPF1P55201 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
BRPF1P55201 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
BRPF1P55201 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
BRPF1P55201 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
BRPF1P55201 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC19.08■□□□□ 0.65
BRPF1P55201 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
BRPF1P55201 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
BRPF1P55201 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC19.08■□□□□ 0.64
BRPF1P55201 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
BRPF1P55201 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
BRPF1P55201 SLC25A24P2-201ENST00000415059 510 ntBASIC19.08■□□□□ 0.64
BRPF1P55201 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
BRPF1P55201 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC19.08■□□□□ 0.64
BRPF1P55201 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
BRPF1P55201 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC19.08■□□□□ 0.64
BRPF1P55201 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC19.08■□□□□ 0.64
BRPF1P55201 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC19.08■□□□□ 0.64
BRPF1P55201 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
BRPF1P55201 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC19.08■□□□□ 0.64
BRPF1P55201 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC19.08■□□□□ 0.64
BRPF1P55201 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC19.08■□□□□ 0.64
BRPF1P55201 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC19.08■□□□□ 0.64
BRPF1P55201 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC19.08■□□□□ 0.64
BRPF1P55201 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC19.08■□□□□ 0.64
BRPF1P55201 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC19.08■□□□□ 0.64
BRPF1P55201 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
BRPF1P55201 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
BRPF1P55201 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC19.08■□□□□ 0.64
BRPF1P55201 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
BRPF1P55201 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC19.08■□□□□ 0.64
BRPF1P55201 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC19.08■□□□□ 0.64
BRPF1P55201 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
BRPF1P55201 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
BRPF1P55201 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
BRPF1P55201 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
BRPF1P55201 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
BRPF1P55201 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC19.08■□□□□ 0.64
BRPF1P55201 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
BRPF1P55201 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
BRPF1P55201 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
BRPF1P55201 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
BRPF1P55201 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BRPF1P55201 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BRPF1P55201 ANKRD30BP2-201ENST00000435744 1610 ntBASIC19.07■□□□□ 0.64
BRPF1P55201 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC19.07■□□□□ 0.64
BRPF1P55201 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
BRPF1P55201 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC19.07■□□□□ 0.64
BRPF1P55201 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
BRPF1P55201 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BRPF1P55201 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
BRPF1P55201 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
BRPF1P55201 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BRPF1P55201 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
BRPF1P55201 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BRPF1P55201 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BRPF1P55201 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC19.07■□□□□ 0.64
BRPF1P55201 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
BRPF1P55201 SSR1P1-201ENST00000407630 814 ntBASIC19.07■□□□□ 0.64
BRPF1P55201 USB1-202ENST00000423271 1217 ntTSL 2 BASIC19.07■□□□□ 0.64
BRPF1P55201 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
BRPF1P55201 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
BRPF1P55201 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC19.07■□□□□ 0.64
BRPF1P55201 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
BRPF1P55201 AL590640.2-201ENST00000457038 527 ntBASIC19.07■□□□□ 0.64
BRPF1P55201 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms