Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLCN4P51793 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLCN4P51793 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.71■□□□□ 0.11
CLCN4P51793 AC126177.1-201ENST00000547829 2218 ntBASIC15.71■□□□□ 0.11
CLCN4P51793 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLCN4P51793 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLCN4P51793 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.71■□□□□ 0.11
CLCN4P51793 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLCN4P51793 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC15.71■□□□□ 0.11
CLCN4P51793 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLCN4P51793 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC15.71■□□□□ 0.11
CLCN4P51793 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.71■□□□□ 0.11
CLCN4P51793 AC019193.1-201ENST00000506678 823 ntBASIC15.71■□□□□ 0.11
CLCN4P51793 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC15.71■□□□□ 0.11
CLCN4P51793 SCARNA21-201ENST00000517026 139 ntBASIC15.71■□□□□ 0.11
CLCN4P51793 LY6E-208ENST00000520531 490 ntTSL 2 BASIC15.71■□□□□ 0.11
CLCN4P51793 MIR3147-201ENST00000577811 66 ntBASIC15.71■□□□□ 0.11
CLCN4P51793 MIR4754-201ENST00000582477 89 ntBASIC15.71■□□□□ 0.11
CLCN4P51793 IRF3-215ENST00000596822 823 ntTSL 3 BASIC15.71■□□□□ 0.11
CLCN4P51793 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.71■□□□□ 0.11
CLCN4P51793 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLCN4P51793 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLCN4P51793 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLCN4P51793 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.71■□□□□ 0.11
CLCN4P51793 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC15.71■□□□□ 0.11
CLCN4P51793 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.71■□□□□ 0.11
CLCN4P51793 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLCN4P51793 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CLCN4P51793 AC104640.1-201ENST00000562617 2109 ntBASIC15.71■□□□□ 0.11
CLCN4P51793 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CLCN4P51793 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CLCN4P51793 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
CLCN4P51793 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CLCN4P51793 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
CLCN4P51793 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.71■□□□□ 0.1
CLCN4P51793 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CLCN4P51793 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN4P51793 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.7■□□□□ 0.1
CLCN4P51793 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN4P51793 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC15.7■□□□□ 0.1
CLCN4P51793 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN4P51793 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN4P51793 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN4P51793 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.7■□□□□ 0.1
CLCN4P51793 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.7■□□□□ 0.1
CLCN4P51793 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN4P51793 AC087481.3-201ENST00000602886 1894 ntBASIC15.7■□□□□ 0.1
CLCN4P51793 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN4P51793 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.7■□□□□ 0.1
CLCN4P51793 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN4P51793 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN4P51793 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN4P51793 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN4P51793 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN4P51793 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC15.7■□□□□ 0.1
CLCN4P51793 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC15.7■□□□□ 0.1
CLCN4P51793 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN4P51793 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN4P51793 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC15.7■□□□□ 0.1
CLCN4P51793 IGLV3-15-201ENST00000518356 244 ntBASIC15.7■□□□□ 0.1
CLCN4P51793 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC15.7■□□□□ 0.1
CLCN4P51793 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN4P51793 AC005962.1-201ENST00000584100 773 ntBASIC15.7■□□□□ 0.1
CLCN4P51793 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC15.7■□□□□ 0.1
CLCN4P51793 AC009884.2-201ENST00000603110 324 ntBASIC15.7■□□□□ 0.1
CLCN4P51793 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN4P51793 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN4P51793 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN4P51793 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN4P51793 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN4P51793 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN4P51793 AC003102.2-201ENST00000589195 1469 ntBASIC15.7■□□□□ 0.1
CLCN4P51793 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN4P51793 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN4P51793 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN4P51793 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.7■□□□□ 0.1
CLCN4P51793 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN4P51793 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.7■□□□□ 0.1
CLCN4P51793 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.7■□□□□ 0.1
CLCN4P51793 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.7■□□□□ 0.1
CLCN4P51793 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCN4P51793 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.7■□□□□ 0.1
CLCN4P51793 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLCN4P51793 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLCN4P51793 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CLCN4P51793 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLCN4P51793 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.69■□□□□ 0.1
CLCN4P51793 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLCN4P51793 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLCN4P51793 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CLCN4P51793 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLCN4P51793 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.69■□□□□ 0.1
CLCN4P51793 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CLCN4P51793 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLCN4P51793 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CLCN4P51793 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.69■□□□□ 0.1
CLCN4P51793 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CLCN4P51793 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLCN4P51793 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLCN4P51793 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms