Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
MRE11P49959 PIN1P1-201ENST00000412108 996 ntBASIC17.66■□□□□ 0.42
MRE11P49959 IGLL3P-201ENST00000412472 434 ntBASIC17.66■□□□□ 0.42
MRE11P49959 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
MRE11P49959 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.66■□□□□ 0.42
MRE11P49959 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.66■□□□□ 0.42
MRE11P49959 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.66■□□□□ 0.42
MRE11P49959 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.66■□□□□ 0.42
MRE11P49959 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.66■□□□□ 0.42
MRE11P49959 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.66■□□□□ 0.42
MRE11P49959 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.66■□□□□ 0.42
MRE11P49959 AC004790.2-201ENST00000623588 572 ntBASIC17.66■□□□□ 0.42
MRE11P49959 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.66■□□□□ 0.42
MRE11P49959 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MRE11P49959 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MRE11P49959 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
MRE11P49959 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MRE11P49959 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MRE11P49959 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC17.66■□□□□ 0.42
MRE11P49959 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC17.66■□□□□ 0.42
MRE11P49959 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MRE11P49959 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.66■□□□□ 0.42
MRE11P49959 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.66■□□□□ 0.42
MRE11P49959 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
MRE11P49959 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MRE11P49959 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.66■□□□□ 0.42
MRE11P49959 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MRE11P49959 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
MRE11P49959 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
MRE11P49959 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC17.66■□□□□ 0.42
MRE11P49959 AL139385.1-201ENST00000611744 3272 ntBASIC17.66■□□□□ 0.42
MRE11P49959 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
MRE11P49959 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MRE11P49959 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MRE11P49959 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
MRE11P49959 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.65■□□□□ 0.42
MRE11P49959 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
MRE11P49959 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MRE11P49959 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
MRE11P49959 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MRE11P49959 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC17.65■□□□□ 0.42
MRE11P49959 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC17.65■□□□□ 0.42
MRE11P49959 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MRE11P49959 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MRE11P49959 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MRE11P49959 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
MRE11P49959 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MRE11P49959 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MRE11P49959 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MRE11P49959 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MRE11P49959 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.65■□□□□ 0.42
MRE11P49959 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.65■□□□□ 0.42
MRE11P49959 KLF2P3-201ENST00000451977 1087 ntBASIC17.65■□□□□ 0.42
MRE11P49959 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.65■□□□□ 0.42
MRE11P49959 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.65■□□□□ 0.42
MRE11P49959 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.65■□□□□ 0.42
MRE11P49959 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MRE11P49959 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.65■□□□□ 0.42
MRE11P49959 AC010336.2-201ENST00000564226 506 ntBASIC17.65■□□□□ 0.42
MRE11P49959 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.65■□□□□ 0.42
MRE11P49959 AL390754.1-201ENST00000619088 582 ntBASIC17.65■□□□□ 0.42
MRE11P49959 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.65■□□□□ 0.42
MRE11P49959 AC010507.1-201ENST00000633895 436 ntBASIC17.65■□□□□ 0.42
MRE11P49959 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MRE11P49959 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
MRE11P49959 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MRE11P49959 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MRE11P49959 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MRE11P49959 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MRE11P49959 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MRE11P49959 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
MRE11P49959 TUBB3P1-201ENST00000405796 1332 ntBASIC17.65■□□□□ 0.42
MRE11P49959 KRT8P24-201ENST00000560290 1559 ntBASIC17.65■□□□□ 0.42
MRE11P49959 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MRE11P49959 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.65■□□□□ 0.42
MRE11P49959 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
MRE11P49959 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
MRE11P49959 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
MRE11P49959 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
MRE11P49959 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.42
MRE11P49959 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
MRE11P49959 AC016397.2-201ENST00000624848 1985 ntBASIC17.64■□□□□ 0.41
MRE11P49959 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC17.64■□□□□ 0.41
MRE11P49959 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MRE11P49959 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
MRE11P49959 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MRE11P49959 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MRE11P49959 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MRE11P49959 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MRE11P49959 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.64■□□□□ 0.41
MRE11P49959 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MRE11P49959 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
MRE11P49959 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.64■□□□□ 0.41
MRE11P49959 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
MRE11P49959 AL627223.1-201ENST00000416693 442 ntBASIC17.64■□□□□ 0.41
MRE11P49959 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.64■□□□□ 0.41
MRE11P49959 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.64■□□□□ 0.41
MRE11P49959 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.64■□□□□ 0.41
MRE11P49959 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.64■□□□□ 0.41
MRE11P49959 AC096734.2-201ENST00000562054 433 ntBASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms