Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CX3CR1P49238 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
CX3CR1P49238 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CX3CR1P49238 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CX3CR1P49238 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CX3CR1P49238 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.29□□□□□ -0.28
CX3CR1P49238 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CX3CR1P49238 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CX3CR1P49238 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.29□□□□□ -0.28
CX3CR1P49238 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CX3CR1P49238 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.29□□□□□ -0.28
CX3CR1P49238 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CX3CR1P49238 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.28□□□□□ -0.28
CX3CR1P49238 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CR1P49238 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CR1P49238 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CR1P49238 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CR1P49238 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CR1P49238 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CR1P49238 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.28□□□□□ -0.28
CX3CR1P49238 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CR1P49238 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CR1P49238 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CR1P49238 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.28□□□□□ -0.28
CX3CR1P49238 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CR1P49238 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CX3CR1P49238 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CR1P49238 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.28□□□□□ -0.28
CX3CR1P49238 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CR1P49238 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CR1P49238 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CR1P49238 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CR1P49238 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CR1P49238 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CX3CR1P49238 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CR1P49238 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CR1P49238 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CR1P49238 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CR1P49238 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.28□□□□□ -0.28
CX3CR1P49238 MEP1AP4-201ENST00000423244 1087 ntBASIC13.28□□□□□ -0.28
CX3CR1P49238 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.28□□□□□ -0.28
CX3CR1P49238 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CR1P49238 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.28□□□□□ -0.28
CX3CR1P49238 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.28□□□□□ -0.28
CX3CR1P49238 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.28□□□□□ -0.28
CX3CR1P49238 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.28□□□□□ -0.28
CX3CR1P49238 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.28□□□□□ -0.28
CX3CR1P49238 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.28□□□□□ -0.28
CX3CR1P49238 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.28□□□□□ -0.28
CX3CR1P49238 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CR1P49238 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.28□□□□□ -0.28
CX3CR1P49238 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CR1P49238 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CX3CR1P49238 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CR1P49238 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CR1P49238 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CR1P49238 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CX3CR1P49238 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CR1P49238 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CR1P49238 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.28□□□□□ -0.28
CX3CR1P49238 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CR1P49238 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.28□□□□□ -0.28
CX3CR1P49238 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.28□□□□□ -0.28
CX3CR1P49238 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.28□□□□□ -0.28
CX3CR1P49238 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.28□□□□□ -0.28
CX3CR1P49238 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
CX3CR1P49238 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CR1P49238 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
CX3CR1P49238 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CR1P49238 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CX3CR1P49238 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CX3CR1P49238 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.28□□□□□ -0.28
CX3CR1P49238 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.28□□□□□ -0.28
CX3CR1P49238 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
CX3CR1P49238 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
CX3CR1P49238 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.27□□□□□ -0.28
CX3CR1P49238 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.28
CX3CR1P49238 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
CX3CR1P49238 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.27□□□□□ -0.28
CX3CR1P49238 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
CX3CR1P49238 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CX3CR1P49238 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CX3CR1P49238 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.27□□□□□ -0.28
CX3CR1P49238 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CX3CR1P49238 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CX3CR1P49238 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
CX3CR1P49238 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
CX3CR1P49238 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
CX3CR1P49238 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CX3CR1P49238 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CX3CR1P49238 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CX3CR1P49238 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CX3CR1P49238 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CX3CR1P49238 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CX3CR1P49238 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CX3CR1P49238 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
CX3CR1P49238 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CX3CR1P49238 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CX3CR1P49238 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CX3CR1P49238 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms