Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GABRA4P48169 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.19□□□□□ -0.14
GABRA4P48169 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GABRA4P48169 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GABRA4P48169 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
GABRA4P48169 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.19□□□□□ -0.14
GABRA4P48169 LINC01101-201ENST00000622953 1884 ntBASIC14.19□□□□□ -0.14
GABRA4P48169 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
GABRA4P48169 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GABRA4P48169 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GABRA4P48169 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.19□□□□□ -0.14
GABRA4P48169 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GABRA4P48169 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.19□□□□□ -0.14
GABRA4P48169 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.19□□□□□ -0.14
GABRA4P48169 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GABRA4P48169 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GABRA4P48169 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
GABRA4P48169 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.19□□□□□ -0.14
GABRA4P48169 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GABRA4P48169 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.19□□□□□ -0.14
GABRA4P48169 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.19□□□□□ -0.14
GABRA4P48169 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.19□□□□□ -0.14
GABRA4P48169 NOP2-211ENST00000540228 668 ntTSL 2 BASIC14.19□□□□□ -0.14
GABRA4P48169 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.19□□□□□ -0.14
GABRA4P48169 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.19□□□□□ -0.14
GABRA4P48169 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.19□□□□□ -0.14
GABRA4P48169 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.19□□□□□ -0.14
GABRA4P48169 AC022748.3-201ENST00000621828 275 ntBASIC14.19□□□□□ -0.14
GABRA4P48169 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
GABRA4P48169 AC007292.2-201ENST00000593524 1812 ntBASIC14.19□□□□□ -0.14
GABRA4P48169 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
GABRA4P48169 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.19□□□□□ -0.14
GABRA4P48169 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.19□□□□□ -0.14
GABRA4P48169 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.19□□□□□ -0.14
GABRA4P48169 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
GABRA4P48169 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
GABRA4P48169 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
GABRA4P48169 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
GABRA4P48169 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
GABRA4P48169 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GABRA4P48169 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
GABRA4P48169 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
GABRA4P48169 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.19□□□□□ -0.14
GABRA4P48169 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
GABRA4P48169 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.19□□□□□ -0.14
GABRA4P48169 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GABRA4P48169 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
GABRA4P48169 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GABRA4P48169 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GABRA4P48169 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GABRA4P48169 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
GABRA4P48169 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GABRA4P48169 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GABRA4P48169 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GABRA4P48169 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GABRA4P48169 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.18□□□□□ -0.14
GABRA4P48169 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GABRA4P48169 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
GABRA4P48169 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GABRA4P48169 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
GABRA4P48169 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GABRA4P48169 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GABRA4P48169 TCAF2P1-201ENST00000291129 2421 ntBASIC14.18□□□□□ -0.14
GABRA4P48169 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GABRA4P48169 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GABRA4P48169 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
GABRA4P48169 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GABRA4P48169 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.18□□□□□ -0.14
GABRA4P48169 OARD1-212ENST00000482515 832 ntTSL 2 BASIC14.18□□□□□ -0.14
GABRA4P48169 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
GABRA4P48169 MIR3615-201ENST00000581999 87 ntBASIC14.18□□□□□ -0.14
GABRA4P48169 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GABRA4P48169 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.18□□□□□ -0.14
GABRA4P48169 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GABRA4P48169 AC008825.2-201ENST00000603374 718 ntBASIC14.18□□□□□ -0.14
GABRA4P48169 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.18□□□□□ -0.14
GABRA4P48169 AL162426.1-201ENST00000624141 743 ntBASIC14.18□□□□□ -0.14
GABRA4P48169 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GABRA4P48169 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.18□□□□□ -0.14
GABRA4P48169 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.18□□□□□ -0.14
GABRA4P48169 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GABRA4P48169 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GABRA4P48169 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
GABRA4P48169 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.18□□□□□ -0.14
GABRA4P48169 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
GABRA4P48169 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GABRA4P48169 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.18□□□□□ -0.14
GABRA4P48169 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GABRA4P48169 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.17□□□□□ -0.14
GABRA4P48169 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GABRA4P48169 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
GABRA4P48169 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GABRA4P48169 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GABRA4P48169 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.17□□□□□ -0.14
GABRA4P48169 AC006058.4-201ENST00000624016 1670 ntBASIC14.17□□□□□ -0.14
GABRA4P48169 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
GABRA4P48169 E2F3P2-201ENST00000447755 1422 ntBASIC14.17□□□□□ -0.14
GABRA4P48169 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
GABRA4P48169 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
GABRA4P48169 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms