Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
APOBEC1P41238 AL390755.1-201ENST00000623716 2027 ntBASIC13.62□□□□□ -0.23
APOBEC1P41238 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.62□□□□□ -0.23
APOBEC1P41238 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOBEC1P41238 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.62□□□□□ -0.23
APOBEC1P41238 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.62□□□□□ -0.23
APOBEC1P41238 AL138709.1-201ENST00000614840 1693 ntBASIC13.62□□□□□ -0.23
APOBEC1P41238 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.62□□□□□ -0.23
APOBEC1P41238 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
APOBEC1P41238 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
APOBEC1P41238 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
APOBEC1P41238 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOBEC1P41238 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
APOBEC1P41238 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
APOBEC1P41238 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
APOBEC1P41238 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
APOBEC1P41238 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOBEC1P41238 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
APOBEC1P41238 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
APOBEC1P41238 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
APOBEC1P41238 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
APOBEC1P41238 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOBEC1P41238 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.61□□□□□ -0.23
APOBEC1P41238 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOBEC1P41238 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOBEC1P41238 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.61□□□□□ -0.23
APOBEC1P41238 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
APOBEC1P41238 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
APOBEC1P41238 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOBEC1P41238 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.61□□□□□ -0.23
APOBEC1P41238 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.61□□□□□ -0.23
APOBEC1P41238 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.61□□□□□ -0.23
APOBEC1P41238 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOBEC1P41238 TPM3P8-201ENST00000330554 643 ntBASIC13.61□□□□□ -0.23
APOBEC1P41238 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
APOBEC1P41238 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.61□□□□□ -0.23
APOBEC1P41238 AC092933.1-201ENST00000393644 945 ntBASIC13.61□□□□□ -0.23
APOBEC1P41238 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.61□□□□□ -0.23
APOBEC1P41238 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.61□□□□□ -0.23
APOBEC1P41238 KRT43P-201ENST00000434019 910 ntBASIC13.61□□□□□ -0.23
APOBEC1P41238 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.61□□□□□ -0.23
APOBEC1P41238 BCRP2-202ENST00000447763 634 ntBASIC13.61□□□□□ -0.23
APOBEC1P41238 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.61□□□□□ -0.23
APOBEC1P41238 AC106760.1-201ENST00000508690 800 ntBASIC13.61□□□□□ -0.23
APOBEC1P41238 BCRP6-201ENST00000510112 632 ntBASIC13.61□□□□□ -0.23
APOBEC1P41238 BCRP7-201ENST00000511549 544 ntBASIC13.61□□□□□ -0.23
APOBEC1P41238 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
APOBEC1P41238 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
APOBEC1P41238 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.61□□□□□ -0.23
APOBEC1P41238 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.61□□□□□ -0.23
APOBEC1P41238 AC025279.2-201ENST00000569730 653 ntBASIC13.61□□□□□ -0.23
APOBEC1P41238 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.61□□□□□ -0.23
APOBEC1P41238 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOBEC1P41238 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOBEC1P41238 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOBEC1P41238 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
APOBEC1P41238 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
APOBEC1P41238 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOBEC1P41238 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.61□□□□□ -0.23
APOBEC1P41238 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
APOBEC1P41238 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOBEC1P41238 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.61□□□□□ -0.23
APOBEC1P41238 AC018529.2-202ENST00000611482 3087 ntBASIC13.61□□□□□ -0.23
APOBEC1P41238 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.61□□□□□ -0.23
APOBEC1P41238 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOBEC1P41238 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
APOBEC1P41238 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.61□□□□□ -0.23
APOBEC1P41238 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
APOBEC1P41238 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
APOBEC1P41238 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
APOBEC1P41238 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.61□□□□□ -0.23
APOBEC1P41238 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
APOBEC1P41238 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.61□□□□□ -0.23
APOBEC1P41238 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.61□□□□□ -0.23
APOBEC1P41238 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOBEC1P41238 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.61□□□□□ -0.23
APOBEC1P41238 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.61□□□□□ -0.23
APOBEC1P41238 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.61□□□□□ -0.23
APOBEC1P41238 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.6□□□□□ -0.23
APOBEC1P41238 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APOBEC1P41238 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.6□□□□□ -0.23
APOBEC1P41238 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APOBEC1P41238 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOBEC1P41238 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOBEC1P41238 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.6□□□□□ -0.23
APOBEC1P41238 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
APOBEC1P41238 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOBEC1P41238 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.6□□□□□ -0.23
APOBEC1P41238 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.6□□□□□ -0.23
APOBEC1P41238 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOBEC1P41238 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOBEC1P41238 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOBEC1P41238 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APOBEC1P41238 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.6□□□□□ -0.23
APOBEC1P41238 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.6□□□□□ -0.23
APOBEC1P41238 AC016694.1-201ENST00000434179 700 ntBASIC13.6□□□□□ -0.23
APOBEC1P41238 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APOBEC1P41238 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.6□□□□□ -0.23
APOBEC1P41238 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.6□□□□□ -0.23
APOBEC1P41238 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms