Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
GDNFP39905 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
GDNFP39905 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
GDNFP39905 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
GDNFP39905 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.19□□□□□ -0.3
GDNFP39905 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GDNFP39905 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.19□□□□□ -0.3
GDNFP39905 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.19□□□□□ -0.3
GDNFP39905 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.19□□□□□ -0.3
GDNFP39905 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.19□□□□□ -0.3
GDNFP39905 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.19□□□□□ -0.3
GDNFP39905 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.19□□□□□ -0.3
GDNFP39905 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.19□□□□□ -0.3
GDNFP39905 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
GDNFP39905 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.19□□□□□ -0.3
GDNFP39905 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
GDNFP39905 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GDNFP39905 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GDNFP39905 AC105021.1-202ENST00000570572 669 ntBASIC13.19□□□□□ -0.3
GDNFP39905 MIR4453-201ENST00000584019 89 ntBASIC13.19□□□□□ -0.3
GDNFP39905 MIR6080-201ENST00000617359 66 ntBASIC13.19□□□□□ -0.3
GDNFP39905 AC139530.3-201ENST00000620344 690 ntBASIC13.19□□□□□ -0.3
GDNFP39905 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.19□□□□□ -0.3
GDNFP39905 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.19□□□□□ -0.3
GDNFP39905 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GDNFP39905 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GDNFP39905 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.19□□□□□ -0.3
GDNFP39905 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
GDNFP39905 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GDNFP39905 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GDNFP39905 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.19□□□□□ -0.3
GDNFP39905 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GDNFP39905 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
GDNFP39905 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GDNFP39905 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
GDNFP39905 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.19□□□□□ -0.3
GDNFP39905 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GDNFP39905 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GDNFP39905 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
GDNFP39905 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
GDNFP39905 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
GDNFP39905 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GDNFP39905 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.19□□□□□ -0.3
GDNFP39905 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GDNFP39905 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
GDNFP39905 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.19□□□□□ -0.3
GDNFP39905 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
GDNFP39905 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
GDNFP39905 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GDNFP39905 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GDNFP39905 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.18□□□□□ -0.3
GDNFP39905 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
GDNFP39905 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
GDNFP39905 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.18□□□□□ -0.3
GDNFP39905 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GDNFP39905 AC130686.1-201ENST00000622936 2466 ntBASIC13.18□□□□□ -0.3
GDNFP39905 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
GDNFP39905 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GDNFP39905 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GDNFP39905 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
GDNFP39905 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.18□□□□□ -0.3
GDNFP39905 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
GDNFP39905 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.18□□□□□ -0.3
GDNFP39905 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.18□□□□□ -0.3
GDNFP39905 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GDNFP39905 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.18□□□□□ -0.3
GDNFP39905 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GDNFP39905 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
GDNFP39905 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
GDNFP39905 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
GDNFP39905 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.18□□□□□ -0.3
GDNFP39905 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.18□□□□□ -0.3
GDNFP39905 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.18□□□□□ -0.3
GDNFP39905 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.18□□□□□ -0.3
GDNFP39905 AL139010.1-201ENST00000454878 894 ntBASIC13.18□□□□□ -0.3
GDNFP39905 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GDNFP39905 AP001160.2-201ENST00000596071 487 ntBASIC13.18□□□□□ -0.3
GDNFP39905 AP001059.3-201ENST00000619053 235 ntBASIC13.18□□□□□ -0.3
GDNFP39905 LINC00628-201ENST00000628516 1289 ntBASIC13.18□□□□□ -0.3
GDNFP39905 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.18□□□□□ -0.3
GDNFP39905 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GDNFP39905 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GDNFP39905 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GDNFP39905 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GDNFP39905 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
GDNFP39905 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GDNFP39905 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GDNFP39905 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
GDNFP39905 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
GDNFP39905 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.18□□□□□ -0.3
GDNFP39905 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
GDNFP39905 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
GDNFP39905 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GDNFP39905 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GDNFP39905 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.18□□□□□ -0.3
GDNFP39905 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.18□□□□□ -0.3
GDNFP39905 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
GDNFP39905 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
GDNFP39905 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GDNFP39905 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms