Protein–RNA interactions for Protein: P21912

SDHB, Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial, humanhuman

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHBP21912 AL365203.3-201ENST00000609742 2057 ntBASIC14.74□□□□□ -0.05
SDHBP21912 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SDHBP21912 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SDHBP21912 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SDHBP21912 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.74□□□□□ -0.05
SDHBP21912 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SDHBP21912 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SDHBP21912 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC14.74□□□□□ -0.05
SDHBP21912 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.74□□□□□ -0.05
SDHBP21912 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.74□□□□□ -0.05
SDHBP21912 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
SDHBP21912 MIR4472-1-201ENST00000584349 80 ntBASIC14.74□□□□□ -0.05
SDHBP21912 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SDHBP21912 AC011247.3-201ENST00000603297 438 ntBASIC14.74□□□□□ -0.05
SDHBP21912 AC244250.3-201ENST00000620749 366 ntBASIC14.74□□□□□ -0.05
SDHBP21912 AL161773.1-201ENST00000624845 863 ntBASIC14.74□□□□□ -0.05
SDHBP21912 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.74□□□□□ -0.05
SDHBP21912 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.74□□□□□ -0.05
SDHBP21912 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SDHBP21912 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.74□□□□□ -0.05
SDHBP21912 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SDHBP21912 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SDHBP21912 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SDHBP21912 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SDHBP21912 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SDHBP21912 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
SDHBP21912 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SDHBP21912 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
SDHBP21912 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SDHBP21912 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
SDHBP21912 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
SDHBP21912 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SDHBP21912 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SDHBP21912 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.74□□□□□ -0.05
SDHBP21912 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SDHBP21912 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SDHBP21912 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SDHBP21912 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SDHBP21912 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
SDHBP21912 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
SDHBP21912 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
SDHBP21912 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SDHBP21912 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SDHBP21912 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SDHBP21912 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.73□□□□□ -0.05
SDHBP21912 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SDHBP21912 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.73□□□□□ -0.05
SDHBP21912 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SDHBP21912 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.73□□□□□ -0.05
SDHBP21912 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
SDHBP21912 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
SDHBP21912 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SDHBP21912 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SDHBP21912 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SDHBP21912 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
SDHBP21912 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SDHBP21912 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SDHBP21912 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SDHBP21912 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC14.73□□□□□ -0.05
SDHBP21912 AC026320.2-201ENST00000434379 478 ntBASIC14.73□□□□□ -0.05
SDHBP21912 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC14.73□□□□□ -0.05
SDHBP21912 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC14.73□□□□□ -0.05
SDHBP21912 LYPLA2P1-203ENST00000447689 696 ntBASIC14.73□□□□□ -0.05
SDHBP21912 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
SDHBP21912 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC14.73□□□□□ -0.05
SDHBP21912 AC022616.1-201ENST00000518688 554 ntBASIC14.73□□□□□ -0.05
SDHBP21912 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.73□□□□□ -0.05
SDHBP21912 AC026803.1-201ENST00000569130 274 ntBASIC14.73□□□□□ -0.05
SDHBP21912 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.73□□□□□ -0.05
SDHBP21912 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SDHBP21912 NUDT4P2-201ENST00000578341 546 ntBASIC14.73□□□□□ -0.05
SDHBP21912 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC14.73□□□□□ -0.05
SDHBP21912 AC105137.3-201ENST00000617588 984 ntBASIC14.73□□□□□ -0.05
SDHBP21912 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
SDHBP21912 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.73□□□□□ -0.05
SDHBP21912 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SDHBP21912 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SDHBP21912 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SDHBP21912 GGT3P-204ENST00000453783 1664 ntBASIC14.73□□□□□ -0.05
SDHBP21912 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.73□□□□□ -0.05
SDHBP21912 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
SDHBP21912 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SDHBP21912 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
SDHBP21912 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SDHBP21912 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SDHBP21912 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
SDHBP21912 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SDHBP21912 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.73□□□□□ -0.05
SDHBP21912 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
SDHBP21912 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.73□□□□□ -0.05
SDHBP21912 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SDHBP21912 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
SDHBP21912 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SDHBP21912 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SDHBP21912 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.72□□□□□ -0.05
SDHBP21912 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SDHBP21912 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.72□□□□□ -0.05
SDHBP21912 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.72□□□□□ -0.05
SDHBP21912 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SDHBP21912 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms