Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COL11A1P12107 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
COL11A1P12107 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COL11A1P12107 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COL11A1P12107 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL11A1P12107 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
COL11A1P12107 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COL11A1P12107 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COL11A1P12107 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC16.68■□□□□ 0.26
COL11A1P12107 TPM1-223ENST00000560445 485 ntTSL 3 BASIC16.68■□□□□ 0.26
COL11A1P12107 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC16.68■□□□□ 0.26
COL11A1P12107 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC16.68■□□□□ 0.26
COL11A1P12107 DRG2-220ENST00000583355 891 ntTSL 3 BASIC16.68■□□□□ 0.26
COL11A1P12107 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
COL11A1P12107 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COL11A1P12107 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL11A1P12107 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.68■□□□□ 0.26
COL11A1P12107 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.68■□□□□ 0.26
COL11A1P12107 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL11A1P12107 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL11A1P12107 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.68■□□□□ 0.26
COL11A1P12107 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC16.68■□□□□ 0.26
COL11A1P12107 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL11A1P12107 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
COL11A1P12107 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COL11A1P12107 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COL11A1P12107 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC16.68■□□□□ 0.26
COL11A1P12107 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC16.68■□□□□ 0.26
COL11A1P12107 AP002353.1-201ENST00000528257 1599 ntBASIC16.68■□□□□ 0.26
COL11A1P12107 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
COL11A1P12107 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COL11A1P12107 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
COL11A1P12107 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
COL11A1P12107 AL627231.1-201ENST00000394467 1125 ntBASIC16.68■□□□□ 0.26
COL11A1P12107 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.68■□□□□ 0.26
COL11A1P12107 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC16.68■□□□□ 0.26
COL11A1P12107 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC16.68■□□□□ 0.26
COL11A1P12107 MBP-227ENST00000526111 581 ntTSL 4 BASIC16.68■□□□□ 0.26
COL11A1P12107 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC16.68■□□□□ 0.26
COL11A1P12107 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
COL11A1P12107 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
COL11A1P12107 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC16.68■□□□□ 0.26
COL11A1P12107 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
COL11A1P12107 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL11A1P12107 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
COL11A1P12107 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL11A1P12107 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL11A1P12107 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
COL11A1P12107 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL11A1P12107 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL11A1P12107 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
COL11A1P12107 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
COL11A1P12107 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL11A1P12107 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
COL11A1P12107 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL11A1P12107 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL11A1P12107 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL11A1P12107 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL11A1P12107 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COL11A1P12107 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.67■□□□□ 0.26
COL11A1P12107 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COL11A1P12107 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
COL11A1P12107 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL11A1P12107 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL11A1P12107 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COL11A1P12107 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COL11A1P12107 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COL11A1P12107 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COL11A1P12107 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC16.67■□□□□ 0.26
COL11A1P12107 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC16.67■□□□□ 0.26
COL11A1P12107 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
COL11A1P12107 OR8T1P-201ENST00000421347 918 ntBASIC16.67■□□□□ 0.26
COL11A1P12107 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC16.67■□□□□ 0.26
COL11A1P12107 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COL11A1P12107 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC16.67■□□□□ 0.26
COL11A1P12107 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC16.67■□□□□ 0.26
COL11A1P12107 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC16.67■□□□□ 0.26
COL11A1P12107 AP002803.1-201ENST00000528836 498 ntBASIC16.67■□□□□ 0.26
COL11A1P12107 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC16.67■□□□□ 0.26
COL11A1P12107 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COL11A1P12107 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC16.67■□□□□ 0.26
COL11A1P12107 MARK2P16-201ENST00000605714 1723 ntBASIC16.67■□□□□ 0.26
COL11A1P12107 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
COL11A1P12107 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
COL11A1P12107 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC16.67■□□□□ 0.26
COL11A1P12107 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL11A1P12107 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL11A1P12107 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL11A1P12107 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COL11A1P12107 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.67■□□□□ 0.26
COL11A1P12107 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL11A1P12107 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
COL11A1P12107 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.66■□□□□ 0.26
COL11A1P12107 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
COL11A1P12107 AC008741.2-201ENST00000612792 3115 ntBASIC16.66■□□□□ 0.26
COL11A1P12107 AJ011931.1-201ENST00000618749 2492 ntBASIC16.66■□□□□ 0.26
COL11A1P12107 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COL11A1P12107 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL11A1P12107 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL11A1P12107 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms