Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.28□□□□□ -0.12
LAMP1P11279 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LAMP1P11279 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LAMP1P11279 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LAMP1P11279 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LAMP1P11279 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LAMP1P11279 C1QBPP1-201ENST00000400117 770 ntBASIC14.28□□□□□ -0.12
LAMP1P11279 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.28□□□□□ -0.12
LAMP1P11279 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LAMP1P11279 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LAMP1P11279 TPT1P11-201ENST00000458482 498 ntBASIC14.28□□□□□ -0.12
LAMP1P11279 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LAMP1P11279 AC104596.2-201ENST00000512793 793 ntBASIC14.28□□□□□ -0.12
LAMP1P11279 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.28□□□□□ -0.12
LAMP1P11279 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.28□□□□□ -0.12
LAMP1P11279 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
LAMP1P11279 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
LAMP1P11279 AP001582.1-201ENST00000525856 295 ntBASIC14.28□□□□□ -0.12
LAMP1P11279 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.28□□□□□ -0.12
LAMP1P11279 AC055876.2-201ENST00000531834 546 ntBASIC14.28□□□□□ -0.12
LAMP1P11279 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.28□□□□□ -0.12
LAMP1P11279 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.28□□□□□ -0.12
LAMP1P11279 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.28□□□□□ -0.12
LAMP1P11279 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.28□□□□□ -0.12
LAMP1P11279 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.28□□□□□ -0.12
LAMP1P11279 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LAMP1P11279 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.28□□□□□ -0.12
LAMP1P11279 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
LAMP1P11279 AC099568.2-201ENST00000609194 695 ntBASIC14.28□□□□□ -0.12
LAMP1P11279 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
LAMP1P11279 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LAMP1P11279 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LAMP1P11279 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LAMP1P11279 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LAMP1P11279 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LAMP1P11279 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LAMP1P11279 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.27□□□□□ -0.12
LAMP1P11279 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.27□□□□□ -0.12
LAMP1P11279 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LAMP1P11279 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.27□□□□□ -0.12
LAMP1P11279 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
LAMP1P11279 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LAMP1P11279 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LAMP1P11279 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.27□□□□□ -0.12
LAMP1P11279 AC055811.4-201ENST00000624039 1754 ntBASIC14.27□□□□□ -0.12
LAMP1P11279 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
LAMP1P11279 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
LAMP1P11279 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LAMP1P11279 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LAMP1P11279 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
LAMP1P11279 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.27□□□□□ -0.12
LAMP1P11279 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
LAMP1P11279 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LAMP1P11279 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LAMP1P11279 KRT8P22-201ENST00000562317 1415 ntBASIC14.27□□□□□ -0.12
LAMP1P11279 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.27□□□□□ -0.13
LAMP1P11279 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.27□□□□□ -0.13
LAMP1P11279 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.27□□□□□ -0.13
LAMP1P11279 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.27□□□□□ -0.13
LAMP1P11279 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.27□□□□□ -0.13
LAMP1P11279 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.27□□□□□ -0.13
LAMP1P11279 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
LAMP1P11279 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LAMP1P11279 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LAMP1P11279 AL359711.2-201ENST00000563105 872 ntBASIC14.27□□□□□ -0.13
LAMP1P11279 AC124283.3-201ENST00000570869 594 ntBASIC14.27□□□□□ -0.13
LAMP1P11279 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.27□□□□□ -0.13
LAMP1P11279 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.27□□□□□ -0.13
LAMP1P11279 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.27□□□□□ -0.13
LAMP1P11279 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.27□□□□□ -0.13
LAMP1P11279 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LAMP1P11279 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LAMP1P11279 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LAMP1P11279 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LAMP1P11279 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LAMP1P11279 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LAMP1P11279 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.27□□□□□ -0.13
LAMP1P11279 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.27□□□□□ -0.13
LAMP1P11279 AL365209.1-201ENST00000624418 6473 ntBASIC14.27□□□□□ -0.13
LAMP1P11279 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LAMP1P11279 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LAMP1P11279 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
LAMP1P11279 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LAMP1P11279 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.27□□□□□ -0.13
LAMP1P11279 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.27□□□□□ -0.13
LAMP1P11279 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
LAMP1P11279 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.26□□□□□ -0.13
LAMP1P11279 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LAMP1P11279 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LAMP1P11279 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LAMP1P11279 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.26□□□□□ -0.13
LAMP1P11279 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
LAMP1P11279 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
LAMP1P11279 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LAMP1P11279 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
LAMP1P11279 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LAMP1P11279 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
LAMP1P11279 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.26□□□□□ -0.13
LAMP1P11279 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.26□□□□□ -0.13
LAMP1P11279 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms