Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
THRAP10827 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
THRAP10827 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.18■□□□□ 0.02
THRAP10827 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
THRAP10827 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.18■□□□□ 0.02
THRAP10827 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.18■□□□□ 0.02
THRAP10827 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.18■□□□□ 0.02
THRAP10827 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.18■□□□□ 0.02
THRAP10827 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.18■□□□□ 0.02
THRAP10827 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.18■□□□□ 0.02
THRAP10827 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.18■□□□□ 0.02
THRAP10827 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.18■□□□□ 0.02
THRAP10827 HLA-V-201ENST00000429037 534 ntBASIC15.18■□□□□ 0.02
THRAP10827 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.18■□□□□ 0.02
THRAP10827 AL162726.2-201ENST00000438986 1017 ntBASIC15.18■□□□□ 0.02
THRAP10827 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
THRAP10827 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.18■□□□□ 0.02
THRAP10827 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.18■□□□□ 0.02
THRAP10827 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.18■□□□□ 0.02
THRAP10827 PHKG1P2-201ENST00000457537 863 ntBASIC15.18■□□□□ 0.02
THRAP10827 FAM86LP-201ENST00000478302 853 ntBASIC15.18■□□□□ 0.02
THRAP10827 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.18■□□□□ 0.02
THRAP10827 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.18■□□□□ 0.02
THRAP10827 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.18■□□□□ 0.02
THRAP10827 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.18■□□□□ 0.02
THRAP10827 RPSAP52-203ENST00000622976 1023 ntBASIC15.18■□□□□ 0.02
THRAP10827 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.18■□□□□ 0.02
THRAP10827 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
THRAP10827 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
THRAP10827 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.18■□□□□ 0.02
THRAP10827 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.18■□□□□ 0.02
THRAP10827 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
THRAP10827 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.18■□□□□ 0.02
THRAP10827 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
THRAP10827 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
THRAP10827 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.18■□□□□ 0.02
THRAP10827 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
THRAP10827 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
THRAP10827 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.18■□□□□ 0.02
THRAP10827 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
THRAP10827 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.18■□□□□ 0.02
THRAP10827 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
THRAP10827 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
THRAP10827 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
THRAP10827 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
THRAP10827 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.18■□□□□ 0.02
THRAP10827 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
THRAP10827 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.17■□□□□ 0.02
THRAP10827 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.17■□□□□ 0.02
THRAP10827 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
THRAP10827 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.17■□□□□ 0.02
THRAP10827 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
THRAP10827 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
THRAP10827 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
THRAP10827 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.17■□□□□ 0.02
THRAP10827 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.17■□□□□ 0.02
THRAP10827 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
THRAP10827 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.17■□□□□ 0.02
THRAP10827 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.17■□□□□ 0.02
THRAP10827 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
THRAP10827 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
THRAP10827 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
THRAP10827 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
THRAP10827 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
THRAP10827 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
THRAP10827 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
THRAP10827 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.17■□□□□ 0.02
THRAP10827 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.17■□□□□ 0.02
THRAP10827 AC136604.1-201ENST00000418535 575 ntBASIC15.17■□□□□ 0.02
THRAP10827 RPS2P32-201ENST00000439199 892 ntBASIC15.17■□□□□ 0.02
THRAP10827 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
THRAP10827 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
THRAP10827 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.17■□□□□ 0.02
THRAP10827 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.17■□□□□ 0.02
THRAP10827 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.17■□□□□ 0.02
THRAP10827 HNRNPUP1-201ENST00000554987 333 ntBASIC15.17■□□□□ 0.02
THRAP10827 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.17■□□□□ 0.02
THRAP10827 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.17■□□□□ 0.02
THRAP10827 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.17■□□□□ 0.02
THRAP10827 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.17■□□□□ 0.02
THRAP10827 BRI3BPP1-201ENST00000594224 787 ntBASIC15.17■□□□□ 0.02
THRAP10827 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.17■□□□□ 0.02
THRAP10827 AC133539.2-201ENST00000604757 467 ntBASIC15.17■□□□□ 0.02
THRAP10827 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
THRAP10827 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.17■□□□□ 0.02
THRAP10827 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
THRAP10827 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.17■□□□□ 0.02
THRAP10827 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.17■□□□□ 0.02
THRAP10827 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
THRAP10827 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.17■□□□□ 0.02
THRAP10827 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
THRAP10827 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
THRAP10827 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
THRAP10827 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
THRAP10827 ST20-AS1-201ENST00000560255 4223 ntBASIC15.17■□□□□ 0.02
THRAP10827 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
THRAP10827 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.17■□□□□ 0.02
THRAP10827 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.17■□□□□ 0.02
THRAP10827 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
THRAP10827 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms