Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
SMIM17P0DL12 MAX-210ENST00000555419 765 ntTSL 5 BASIC11.31□□□□□ -0.6
SMIM17P0DL12 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC11.31□□□□□ -0.6
SMIM17P0DL12 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC11.31□□□□□ -0.6
SMIM17P0DL12 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
SMIM17P0DL12 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC11.31□□□□□ -0.6
SMIM17P0DL12 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC11.31□□□□□ -0.6
SMIM17P0DL12 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC11.31□□□□□ -0.6
SMIM17P0DL12 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC11.31□□□□□ -0.6
SMIM17P0DL12 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM17P0DL12 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM17P0DL12 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
SMIM17P0DL12 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM17P0DL12 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM17P0DL12 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
SMIM17P0DL12 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM17P0DL12 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC11.31□□□□□ -0.6
SMIM17P0DL12 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM17P0DL12 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM17P0DL12 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM17P0DL12 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM17P0DL12 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM17P0DL12 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM17P0DL12 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM17P0DL12 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM17P0DL12 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC11.31□□□□□ -0.6
SMIM17P0DL12 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM17P0DL12 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM17P0DL12 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM17P0DL12 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM17P0DL12 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
SMIM17P0DL12 SFMBT2-201ENST00000361972 7922 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM17P0DL12 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
SMIM17P0DL12 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM17P0DL12 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
SMIM17P0DL12 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC11.3□□□□□ -0.6
SMIM17P0DL12 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC11.3□□□□□ -0.6
SMIM17P0DL12 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM17P0DL12 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC11.3□□□□□ -0.6
SMIM17P0DL12 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC11.3□□□□□ -0.6
SMIM17P0DL12 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
SMIM17P0DL12 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
SMIM17P0DL12 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM17P0DL12 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC11.3□□□□□ -0.6
SMIM17P0DL12 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC11.3□□□□□ -0.6
SMIM17P0DL12 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC11.3□□□□□ -0.6
SMIM17P0DL12 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM17P0DL12 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM17P0DL12 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC11.3□□□□□ -0.6
SMIM17P0DL12 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM17P0DL12 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM17P0DL12 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM17P0DL12 TFAMP1-201ENST00000412727 736 ntBASIC11.3□□□□□ -0.6
SMIM17P0DL12 AL671277.1-201ENST00000429656 993 ntBASIC11.3□□□□□ -0.6
SMIM17P0DL12 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC11.3□□□□□ -0.6
SMIM17P0DL12 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC11.3□□□□□ -0.6
SMIM17P0DL12 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC11.3□□□□□ -0.6
SMIM17P0DL12 IGHV3-22-201ENST00000520721 359 ntBASIC11.3□□□□□ -0.6
SMIM17P0DL12 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC11.3□□□□□ -0.6
SMIM17P0DL12 CD63-204ENST00000546939 779 ntTSL 3 BASIC11.3□□□□□ -0.6
SMIM17P0DL12 AL135744.1-201ENST00000565098 629 ntBASIC11.3□□□□□ -0.6
SMIM17P0DL12 NAA38-207ENST00000576861 556 ntTSL 3 BASIC11.3□□□□□ -0.6
SMIM17P0DL12 AP002472.1-201ENST00000577490 586 ntBASIC11.3□□□□□ -0.6
SMIM17P0DL12 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC11.3□□□□□ -0.6
SMIM17P0DL12 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM17P0DL12 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM17P0DL12 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM17P0DL12 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM17P0DL12 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC11.3□□□□□ -0.6
SMIM17P0DL12 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM17P0DL12 AL928921.2-201ENST00000641325 2442 ntBASIC11.3□□□□□ -0.6
SMIM17P0DL12 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
SMIM17P0DL12 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM17P0DL12 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM17P0DL12 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM17P0DL12 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM17P0DL12 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM17P0DL12 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM17P0DL12 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM17P0DL12 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM17P0DL12 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM17P0DL12 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM17P0DL12 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM17P0DL12 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC11.3□□□□□ -0.6
SMIM17P0DL12 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
SMIM17P0DL12 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
SMIM17P0DL12 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM17P0DL12 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC11.3□□□□□ -0.6
SMIM17P0DL12 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM17P0DL12 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SMIM17P0DL12 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC11.3□□□□□ -0.6
SMIM17P0DL12 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
SMIM17P0DL12 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM17P0DL12 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM17P0DL12 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM17P0DL12 USO1-201ENST00000264904 4135 ntTSL 2 BASIC11.29□□□□□ -0.6
SMIM17P0DL12 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM17P0DL12 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM17P0DL12 AL359881.3-201ENST00000602640 1721 ntBASIC11.29□□□□□ -0.6
SMIM17P0DL12 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms