Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AC140878.1-201ENST00000565277 250 ntBASIC13.27□□□□□ -0.29
UBCP0CG48 AC092337.1-201ENST00000568699 1129 ntBASIC13.27□□□□□ -0.29
UBCP0CG48 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.27□□□□□ -0.29
UBCP0CG48 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBCP0CG48 Z92544.3-201ENST00000624747 417 ntBASIC13.27□□□□□ -0.29
UBCP0CG48 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBCP0CG48 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBCP0CG48 AC018665.1-201ENST00000622927 1362 ntBASIC13.27□□□□□ -0.29
UBCP0CG48 AC015802.1-201ENST00000588104 1449 ntBASIC13.27□□□□□ -0.29
UBCP0CG48 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UBCP0CG48 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBCP0CG48 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UBCP0CG48 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
UBCP0CG48 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.27□□□□□ -0.29
UBCP0CG48 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBCP0CG48 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.27□□□□□ -0.29
UBCP0CG48 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
UBCP0CG48 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBCP0CG48 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.27□□□□□ -0.29
UBCP0CG48 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UBCP0CG48 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBCP0CG48 HSPA7-201ENST00000445535 1927 ntBASIC13.27□□□□□ -0.29
UBCP0CG48 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
UBCP0CG48 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBCP0CG48 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBCP0CG48 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBCP0CG48 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UBCP0CG48 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.27□□□□□ -0.29
UBCP0CG48 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.29
UBCP0CG48 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBCP0CG48 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
UBCP0CG48 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
UBCP0CG48 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBCP0CG48 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
UBCP0CG48 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBCP0CG48 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
UBCP0CG48 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
UBCP0CG48 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
UBCP0CG48 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBCP0CG48 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
UBCP0CG48 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBCP0CG48 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBCP0CG48 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBCP0CG48 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBCP0CG48 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBCP0CG48 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.26□□□□□ -0.29
UBCP0CG48 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.26□□□□□ -0.29
UBCP0CG48 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBCP0CG48 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.26□□□□□ -0.29
UBCP0CG48 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.26□□□□□ -0.29
UBCP0CG48 AC107890.1-201ENST00000422478 521 ntBASIC13.26□□□□□ -0.29
UBCP0CG48 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.26□□□□□ -0.29
UBCP0CG48 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.26□□□□□ -0.29
UBCP0CG48 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
UBCP0CG48 AC004967.1-201ENST00000453589 447 ntBASIC13.26□□□□□ -0.29
UBCP0CG48 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.26□□□□□ -0.29
UBCP0CG48 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBCP0CG48 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.26□□□□□ -0.29
UBCP0CG48 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
UBCP0CG48 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.26□□□□□ -0.29
UBCP0CG48 AC109322.1-201ENST00000524499 1264 ntBASIC13.26□□□□□ -0.29
UBCP0CG48 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.26□□□□□ -0.29
UBCP0CG48 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBCP0CG48 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
UBCP0CG48 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.26□□□□□ -0.29
UBCP0CG48 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
UBCP0CG48 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
UBCP0CG48 AC044860.1-202ENST00000559481 777 ntBASIC13.26□□□□□ -0.29
UBCP0CG48 AC025678.2-201ENST00000562061 970 ntBASIC13.26□□□□□ -0.29
UBCP0CG48 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.26□□□□□ -0.29
UBCP0CG48 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.26□□□□□ -0.29
UBCP0CG48 AC015911.4-201ENST00000588022 1070 ntBASIC13.26□□□□□ -0.29
UBCP0CG48 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.26□□□□□ -0.29
UBCP0CG48 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
UBCP0CG48 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.26□□□□□ -0.29
UBCP0CG48 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
UBCP0CG48 AC055811.4-201ENST00000624039 1754 ntBASIC13.26□□□□□ -0.29
UBCP0CG48 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
UBCP0CG48 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBCP0CG48 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
UBCP0CG48 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBCP0CG48 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.26□□□□□ -0.29
UBCP0CG48 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBCP0CG48 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBCP0CG48 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBCP0CG48 LINC01230-201ENST00000625222 3017 ntBASIC13.26□□□□□ -0.29
UBCP0CG48 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
UBCP0CG48 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
UBCP0CG48 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBCP0CG48 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
UBCP0CG48 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UBCP0CG48 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBCP0CG48 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBCP0CG48 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.25□□□□□ -0.29
UBCP0CG48 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UBCP0CG48 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBCP0CG48 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
UBCP0CG48 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
UBCP0CG48 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
UBCP0CG48 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms