Protein–RNA interactions for Protein: P05023

ATP1A1, Sodium/potassium-transporting ATPase subunit alpha-1, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1P05023 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATP1A1P05023 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATP1A1P05023 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ATP1A1P05023 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
ATP1A1P05023 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.07■□□□□ 0.16
ATP1A1P05023 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATP1A1P05023 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ATP1A1P05023 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATP1A1P05023 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ATP1A1P05023 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC16.07■□□□□ 0.16
ATP1A1P05023 AGGF1P1-201ENST00000509500 2073 ntBASIC16.07■□□□□ 0.16
ATP1A1P05023 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATP1A1P05023 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC16.07■□□□□ 0.16
ATP1A1P05023 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC16.07■□□□□ 0.16
ATP1A1P05023 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.07■□□□□ 0.16
ATP1A1P05023 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATP1A1P05023 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATP1A1P05023 KCP-203ENST00000610776 5108 ntTSL 5 BASIC16.07■□□□□ 0.16
ATP1A1P05023 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ATP1A1P05023 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ATP1A1P05023 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATP1A1P05023 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP1A1P05023 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP1A1P05023 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP1A1P05023 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATP1A1P05023 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP1A1P05023 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP1A1P05023 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP1A1P05023 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP1A1P05023 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
ATP1A1P05023 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP1A1P05023 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.06■□□□□ 0.16
ATP1A1P05023 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATP1A1P05023 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
ATP1A1P05023 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP1A1P05023 GOLGA8VP-201ENST00000559009 1798 ntBASIC16.06■□□□□ 0.16
ATP1A1P05023 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
ATP1A1P05023 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATP1A1P05023 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP1A1P05023 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC16.06■□□□□ 0.16
ATP1A1P05023 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
ATP1A1P05023 AL035456.1-201ENST00000456064 1369 ntBASIC16.06■□□□□ 0.16
ATP1A1P05023 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP1A1P05023 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATP1A1P05023 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.06■□□□□ 0.16
ATP1A1P05023 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
ATP1A1P05023 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.06■□□□□ 0.16
ATP1A1P05023 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.06■□□□□ 0.16
ATP1A1P05023 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.06■□□□□ 0.16
ATP1A1P05023 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.06■□□□□ 0.16
ATP1A1P05023 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATP1A1P05023 AC069120.2-201ENST00000524091 540 ntBASIC16.06■□□□□ 0.16
ATP1A1P05023 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.06■□□□□ 0.16
ATP1A1P05023 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.06■□□□□ 0.16
ATP1A1P05023 MIR6069-201ENST00000620069 79 ntBASIC16.06■□□□□ 0.16
ATP1A1P05023 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC16.06■□□□□ 0.16
ATP1A1P05023 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
ATP1A1P05023 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP1A1P05023 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP1A1P05023 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATP1A1P05023 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP1A1P05023 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP1A1P05023 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATP1A1P05023 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP1A1P05023 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
ATP1A1P05023 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.06■□□□□ 0.16
ATP1A1P05023 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATP1A1P05023 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.05■□□□□ 0.16
ATP1A1P05023 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP1A1P05023 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATP1A1P05023 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
ATP1A1P05023 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP1A1P05023 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP1A1P05023 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP1A1P05023 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
ATP1A1P05023 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP1A1P05023 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP1A1P05023 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ATP1A1P05023 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
ATP1A1P05023 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.05■□□□□ 0.16
ATP1A1P05023 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP1A1P05023 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP1A1P05023 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC16.05■□□□□ 0.16
ATP1A1P05023 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP1A1P05023 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP1A1P05023 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
ATP1A1P05023 AL080243.2-201ENST00000418783 582 ntBASIC16.05■□□□□ 0.16
ATP1A1P05023 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.05■□□□□ 0.16
ATP1A1P05023 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.05■□□□□ 0.16
ATP1A1P05023 IGHV3-42-201ENST00000520410 361 ntBASIC16.05■□□□□ 0.16
ATP1A1P05023 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.05■□□□□ 0.16
ATP1A1P05023 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.05■□□□□ 0.16
ATP1A1P05023 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.05■□□□□ 0.16
ATP1A1P05023 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.05■□□□□ 0.16
ATP1A1P05023 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
ATP1A1P05023 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.05■□□□□ 0.16
ATP1A1P05023 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
ATP1A1P05023 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.05■□□□□ 0.16
ATP1A1P05023 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.05■□□□□ 0.16
ATP1A1P05023 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms