Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
APOBP04114 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC9.04□□□□□ -0.96
APOBP04114 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
APOBP04114 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC9.04□□□□□ -0.96
APOBP04114 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
APOBP04114 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
APOBP04114 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
APOBP04114 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
APOBP04114 AC005740.1-201ENST00000515639 522 ntBASIC9.04□□□□□ -0.96
APOBP04114 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
APOBP04114 AC142086.5-202ENST00000562500 217 ntBASIC9.04□□□□□ -0.96
APOBP04114 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC9.04□□□□□ -0.96
APOBP04114 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
APOBP04114 AC004466.2-201ENST00000614749 516 ntBASIC9.04□□□□□ -0.96
APOBP04114 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
APOBP04114 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
APOBP04114 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
APOBP04114 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
APOBP04114 MSANTD2P1-201ENST00000445341 1368 ntBASIC9.03□□□□□ -0.96
APOBP04114 WASH3P-207ENST00000560956 1394 ntBASIC9.03□□□□□ -0.96
APOBP04114 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
APOBP04114 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
APOBP04114 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
APOBP04114 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
APOBP04114 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC9.03□□□□□ -0.96
APOBP04114 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC9.03□□□□□ -0.96
APOBP04114 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
APOBP04114 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
APOBP04114 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
APOBP04114 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC9.03□□□□□ -0.96
APOBP04114 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC9.03□□□□□ -0.96
APOBP04114 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC9.03□□□□□ -0.96
APOBP04114 FBXO36P1-201ENST00000579006 471 ntBASIC9.03□□□□□ -0.96
APOBP04114 PSME2-217ENST00000615264 874 ntTSL 5 BASIC9.03□□□□□ -0.96
APOBP04114 PSME2-218ENST00000630027 185 ntTSL 3 BASIC9.03□□□□□ -0.96
APOBP04114 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
APOBP04114 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC9.03□□□□□ -0.96
APOBP04114 AC099398.1-201ENST00000567919 2776 ntBASIC9.03□□□□□ -0.96
APOBP04114 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
APOBP04114 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
APOBP04114 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
APOBP04114 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC9.03□□□□□ -0.96
APOBP04114 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
APOBP04114 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
APOBP04114 KRT8P30-201ENST00000432100 650 ntBASIC9.03□□□□□ -0.96
APOBP04114 MAGEA7P-201ENST00000436482 942 ntBASIC9.03□□□□□ -0.96
APOBP04114 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC9.03□□□□□ -0.96
APOBP04114 RN7SL846P-201ENST00000467429 292 ntBASIC9.03□□□□□ -0.96
APOBP04114 PFN2-212ENST00000490975 858 ntTSL 4 BASIC9.03□□□□□ -0.96
APOBP04114 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC9.03□□□□□ -0.96
APOBP04114 AC117503.4-201ENST00000623229 1418 ntBASIC9.03□□□□□ -0.96
APOBP04114 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
APOBP04114 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC9.03□□□□□ -0.96
APOBP04114 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
APOBP04114 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
APOBP04114 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
APOBP04114 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC9.03□□□□□ -0.96
APOBP04114 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
APOBP04114 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC9.03□□□□□ -0.96
APOBP04114 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
APOBP04114 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
APOBP04114 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC9.03□□□□□ -0.96
APOBP04114 NHP2P1-201ENST00000335274 462 ntBASIC9.03□□□□□ -0.96
APOBP04114 NME6-208ENST00000435684 599 ntTSL 2 BASIC9.03□□□□□ -0.96
APOBP04114 BCRP4-201ENST00000506079 804 ntBASIC9.03□□□□□ -0.96
APOBP04114 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC9.03□□□□□ -0.96
APOBP04114 AC009093.10-201ENST00000641956 1442 ntBASIC9.03□□□□□ -0.96
APOBP04114 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
APOBP04114 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC9.03□□□□□ -0.96
APOBP04114 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC9.03□□□□□ -0.96
APOBP04114 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
APOBP04114 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
APOBP04114 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
APOBP04114 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC9.02□□□□□ -0.96
APOBP04114 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.96
APOBP04114 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
APOBP04114 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.96
APOBP04114 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC9.02□□□□□ -0.96
APOBP04114 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC9.02□□□□□ -0.96
APOBP04114 ZNF877P-201ENST00000437614 612 ntBASIC9.02□□□□□ -0.96
APOBP04114 AC010900.1-201ENST00000449849 1296 ntBASIC9.02□□□□□ -0.96
APOBP04114 ALG1L3P-201ENST00000503331 765 ntBASIC9.02□□□□□ -0.96
APOBP04114 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC9.02□□□□□ -0.96
APOBP04114 AL591424.3-201ENST00000614278 872 ntBASIC9.02□□□□□ -0.96
APOBP04114 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
APOBP04114 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
APOBP04114 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC9.02□□□□□ -0.97
APOBP04114 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
APOBP04114 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
APOBP04114 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC9.02□□□□□ -0.97
APOBP04114 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
APOBP04114 CYP2T1P-202ENST00000641596 2535 ntBASIC9.02□□□□□ -0.97
APOBP04114 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC9.02□□□□□ -0.97
APOBP04114 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
APOBP04114 SIRPB3P-201ENST00000340424 1216 ntBASIC9.02□□□□□ -0.97
APOBP04114 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
APOBP04114 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
APOBP04114 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
APOBP04114 PPP1R2P4-201ENST00000424051 595 ntBASIC9.02□□□□□ -0.97
APOBP04114 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms