Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
IFNA1P01562 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC11.96□□□□□ -0.49
IFNA1P01562 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC11.96□□□□□ -0.49
IFNA1P01562 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
IFNA1P01562 SYS1-203ENST00000414310 795 ntTSL 3 BASIC11.96□□□□□ -0.49
IFNA1P01562 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
IFNA1P01562 EEF1DP4-201ENST00000446006 880 ntBASIC11.96□□□□□ -0.49
IFNA1P01562 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
IFNA1P01562 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC11.96□□□□□ -0.49
IFNA1P01562 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC11.96□□□□□ -0.49
IFNA1P01562 CIPC-205ENST00000555437 566 ntTSL 3 BASIC11.96□□□□□ -0.49
IFNA1P01562 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC11.96□□□□□ -0.49
IFNA1P01562 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC11.96□□□□□ -0.49
IFNA1P01562 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
IFNA1P01562 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC11.96□□□□□ -0.49
IFNA1P01562 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC11.96□□□□□ -0.49
IFNA1P01562 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC11.96□□□□□ -0.49
IFNA1P01562 AL355877.3-201ENST00000622820 899 ntBASIC11.96□□□□□ -0.49
IFNA1P01562 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
IFNA1P01562 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
IFNA1P01562 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
IFNA1P01562 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC11.96□□□□□ -0.5
IFNA1P01562 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
IFNA1P01562 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
IFNA1P01562 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
IFNA1P01562 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
IFNA1P01562 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
IFNA1P01562 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
IFNA1P01562 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC11.96□□□□□ -0.5
IFNA1P01562 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC11.96□□□□□ -0.5
IFNA1P01562 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
IFNA1P01562 AL607033.1-201ENST00000623900 1599 ntBASIC11.96□□□□□ -0.5
IFNA1P01562 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
IFNA1P01562 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
IFNA1P01562 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
IFNA1P01562 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
IFNA1P01562 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC11.96□□□□□ -0.5
IFNA1P01562 REXO1L4P-201ENST00000605109 1937 ntBASIC11.96□□□□□ -0.5
IFNA1P01562 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 ZBTB45P1-201ENST00000452761 1456 ntBASIC11.95□□□□□ -0.5
IFNA1P01562 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC11.95□□□□□ -0.5
IFNA1P01562 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
IFNA1P01562 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
IFNA1P01562 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
IFNA1P01562 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC11.95□□□□□ -0.5
IFNA1P01562 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
IFNA1P01562 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC11.95□□□□□ -0.5
IFNA1P01562 AC136604.1-201ENST00000418535 575 ntBASIC11.95□□□□□ -0.5
IFNA1P01562 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC11.95□□□□□ -0.5
IFNA1P01562 AC092474.2-201ENST00000424288 719 ntBASIC11.95□□□□□ -0.5
IFNA1P01562 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 AC104076.2-201ENST00000448912 469 ntBASIC11.95□□□□□ -0.5
IFNA1P01562 THTPA-204ENST00000554970 569 ntTSL 4 BASIC11.95□□□□□ -0.5
IFNA1P01562 THTPA-206ENST00000556015 535 ntTSL 3 BASIC11.95□□□□□ -0.5
IFNA1P01562 ETFA-208ENST00000559602 792 ntTSL 3 BASIC11.95□□□□□ -0.5
IFNA1P01562 IGHV3OR16-7-201ENST00000604106 360 ntBASIC11.95□□□□□ -0.5
IFNA1P01562 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC11.95□□□□□ -0.5
IFNA1P01562 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC11.95□□□□□ -0.5
IFNA1P01562 AL121956.5-201ENST00000625261 221 ntBASIC11.95□□□□□ -0.5
IFNA1P01562 AC107918.4-202ENST00000641623 219 ntBASIC11.95□□□□□ -0.5
IFNA1P01562 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC11.95□□□□□ -0.5
IFNA1P01562 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
IFNA1P01562 GPR179-204ENST00000621958 7983 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
IFNA1P01562 PLB1-201ENST00000327757 5107 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
IFNA1P01562 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms