Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GPC4O75487 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GPC4O75487 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.17■□□□□ 0.02
GPC4O75487 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.17■□□□□ 0.02
GPC4O75487 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GPC4O75487 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
GPC4O75487 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GPC4O75487 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GPC4O75487 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GPC4O75487 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GPC4O75487 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GPC4O75487 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
GPC4O75487 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GPC4O75487 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
GPC4O75487 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.17■□□□□ 0.02
GPC4O75487 AC098850.1-201ENST00000419919 790 ntBASIC15.17■□□□□ 0.02
GPC4O75487 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
GPC4O75487 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.17■□□□□ 0.02
GPC4O75487 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.17■□□□□ 0.02
GPC4O75487 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.17■□□□□ 0.02
GPC4O75487 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.17■□□□□ 0.02
GPC4O75487 AL049840.4-201ENST00000602422 811 ntBASIC15.17■□□□□ 0.02
GPC4O75487 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.17■□□□□ 0.02
GPC4O75487 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC15.17■□□□□ 0.02
GPC4O75487 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GPC4O75487 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.17■□□□□ 0.02
GPC4O75487 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
GPC4O75487 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.17■□□□□ 0.02
GPC4O75487 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GPC4O75487 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GPC4O75487 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GPC4O75487 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GPC4O75487 DMBT1P1-203ENST00000636837 4628 ntBASIC15.17■□□□□ 0.02
GPC4O75487 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.17■□□□□ 0.02
GPC4O75487 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.17■□□□□ 0.02
GPC4O75487 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GPC4O75487 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
GPC4O75487 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.17■□□□□ 0.02
GPC4O75487 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GPC4O75487 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GPC4O75487 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GPC4O75487 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
GPC4O75487 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GPC4O75487 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.16■□□□□ 0.02
GPC4O75487 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GPC4O75487 AC131212.3-201ENST00000624087 4219 ntBASIC15.16■□□□□ 0.02
GPC4O75487 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GPC4O75487 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.16■□□□□ 0.02
GPC4O75487 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GPC4O75487 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GPC4O75487 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GPC4O75487 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.16■□□□□ 0.02
GPC4O75487 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GPC4O75487 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
GPC4O75487 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GPC4O75487 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
GPC4O75487 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.16■□□□□ 0.02
GPC4O75487 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
GPC4O75487 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
GPC4O75487 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
GPC4O75487 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
GPC4O75487 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.16■□□□□ 0.02
GPC4O75487 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.16■□□□□ 0.02
GPC4O75487 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GPC4O75487 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.16■□□□□ 0.02
GPC4O75487 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GPC4O75487 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GPC4O75487 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
GPC4O75487 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.16■□□□□ 0.02
GPC4O75487 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GPC4O75487 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.16■□□□□ 0.02
GPC4O75487 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.16■□□□□ 0.02
GPC4O75487 AC104596.2-201ENST00000512793 793 ntBASIC15.16■□□□□ 0.02
GPC4O75487 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.16■□□□□ 0.02
GPC4O75487 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.16■□□□□ 0.02
GPC4O75487 AC123567.1-201ENST00000548294 1261 ntBASIC15.16■□□□□ 0.02
GPC4O75487 TMEM261P1-201ENST00000604899 340 ntBASIC15.16■□□□□ 0.02
GPC4O75487 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
GPC4O75487 GRK6P1-201ENST00000400595 1711 ntBASIC15.16■□□□□ 0.02
GPC4O75487 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.16■□□□□ 0.02
GPC4O75487 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GPC4O75487 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
GPC4O75487 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GPC4O75487 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.16■□□□□ 0.02
GPC4O75487 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
GPC4O75487 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
GPC4O75487 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
GPC4O75487 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GPC4O75487 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.16■□□□□ 0.02
GPC4O75487 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
GPC4O75487 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
GPC4O75487 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GPC4O75487 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.16■□□□□ 0.02
GPC4O75487 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.16■□□□□ 0.02
GPC4O75487 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GPC4O75487 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
GPC4O75487 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
GPC4O75487 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.15■□□□□ 0.02
GPC4O75487 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GPC4O75487 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms