Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PRAMEF2O60811 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.18□□□□□ -0.14
PRAMEF2O60811 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
PRAMEF2O60811 KRT90P-201ENST00000549264 1064 ntBASIC14.18□□□□□ -0.14
PRAMEF2O60811 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
PRAMEF2O60811 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.18□□□□□ -0.14
PRAMEF2O60811 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.18□□□□□ -0.14
PRAMEF2O60811 RHOXF1P1-202ENST00000635473 501 ntBASIC14.18□□□□□ -0.14
PRAMEF2O60811 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.18□□□□□ -0.14
PRAMEF2O60811 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.18□□□□□ -0.14
PRAMEF2O60811 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PRAMEF2O60811 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.18□□□□□ -0.14
PRAMEF2O60811 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PRAMEF2O60811 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PRAMEF2O60811 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PRAMEF2O60811 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PRAMEF2O60811 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PRAMEF2O60811 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PRAMEF2O60811 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.18□□□□□ -0.14
PRAMEF2O60811 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PRAMEF2O60811 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
PRAMEF2O60811 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PRAMEF2O60811 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PRAMEF2O60811 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
PRAMEF2O60811 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PRAMEF2O60811 REXO1L5P-201ENST00000622260 2098 ntBASIC14.18□□□□□ -0.14
PRAMEF2O60811 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PRAMEF2O60811 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PRAMEF2O60811 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.17□□□□□ -0.14
PRAMEF2O60811 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PRAMEF2O60811 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PRAMEF2O60811 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PRAMEF2O60811 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PRAMEF2O60811 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PRAMEF2O60811 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PRAMEF2O60811 AC097376.2-205ENST00000610159 5334 ntBASIC14.17□□□□□ -0.14
PRAMEF2O60811 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PRAMEF2O60811 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PRAMEF2O60811 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PRAMEF2O60811 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PRAMEF2O60811 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PRAMEF2O60811 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.17□□□□□ -0.14
PRAMEF2O60811 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PRAMEF2O60811 LRRC59-203ENST00000576448 1531 ntBASIC14.17□□□□□ -0.14
PRAMEF2O60811 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PRAMEF2O60811 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PRAMEF2O60811 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PRAMEF2O60811 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PRAMEF2O60811 BRWD1P1-201ENST00000401091 371 ntBASIC14.17□□□□□ -0.14
PRAMEF2O60811 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.17□□□□□ -0.14
PRAMEF2O60811 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PRAMEF2O60811 YBX1P6-201ENST00000442962 1002 ntBASIC14.17□□□□□ -0.14
PRAMEF2O60811 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PRAMEF2O60811 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PRAMEF2O60811 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.17□□□□□ -0.14
PRAMEF2O60811 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PRAMEF2O60811 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
PRAMEF2O60811 MIR4525-201ENST00000580000 75 ntBASIC14.17□□□□□ -0.14
PRAMEF2O60811 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.17□□□□□ -0.14
PRAMEF2O60811 AC244669.2-201ENST00000612320 853 ntBASIC14.17□□□□□ -0.14
PRAMEF2O60811 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.17□□□□□ -0.14
PRAMEF2O60811 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PRAMEF2O60811 AL603764.1-201ENST00000636452 321 ntBASIC14.17□□□□□ -0.14
PRAMEF2O60811 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PRAMEF2O60811 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PRAMEF2O60811 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PRAMEF2O60811 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.17□□□□□ -0.14
PRAMEF2O60811 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
PRAMEF2O60811 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PRAMEF2O60811 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PRAMEF2O60811 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PRAMEF2O60811 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.17□□□□□ -0.14
PRAMEF2O60811 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PRAMEF2O60811 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
PRAMEF2O60811 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PRAMEF2O60811 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PRAMEF2O60811 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PRAMEF2O60811 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PRAMEF2O60811 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.17□□□□□ -0.14
PRAMEF2O60811 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PRAMEF2O60811 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.17□□□□□ -0.14
PRAMEF2O60811 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PRAMEF2O60811 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PRAMEF2O60811 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
PRAMEF2O60811 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PRAMEF2O60811 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PRAMEF2O60811 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PRAMEF2O60811 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PRAMEF2O60811 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PRAMEF2O60811 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PRAMEF2O60811 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.16□□□□□ -0.14
PRAMEF2O60811 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.16□□□□□ -0.14
PRAMEF2O60811 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
PRAMEF2O60811 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.16□□□□□ -0.14
PRAMEF2O60811 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.16□□□□□ -0.14
PRAMEF2O60811 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PRAMEF2O60811 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PRAMEF2O60811 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PRAMEF2O60811 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
PRAMEF2O60811 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms