Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.41□□□□□ -0.1
CLOCKO15516 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.41□□□□□ -0.1
CLOCKO15516 AC125807.1-201ENST00000483097 614 ntBASIC14.41□□□□□ -0.1
CLOCKO15516 SLC25A39P2-201ENST00000537614 270 ntBASIC14.41□□□□□ -0.1
CLOCKO15516 DUX4L27-201ENST00000554796 1261 ntBASIC14.41□□□□□ -0.1
CLOCKO15516 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.41□□□□□ -0.1
CLOCKO15516 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.41□□□□□ -0.1
CLOCKO15516 LINC01225-203ENST00000563550 1244 ntBASIC14.41□□□□□ -0.1
CLOCKO15516 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CLOCKO15516 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLOCKO15516 AC026979.3-201ENST00000607315 403 ntBASIC14.41□□□□□ -0.1
CLOCKO15516 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLOCKO15516 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLOCKO15516 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.41□□□□□ -0.1
CLOCKO15516 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLOCKO15516 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLOCKO15516 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLOCKO15516 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLOCKO15516 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLOCKO15516 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.41□□□□□ -0.1
CLOCKO15516 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLOCKO15516 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLOCKO15516 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLOCKO15516 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLOCKO15516 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.41□□□□□ -0.1
CLOCKO15516 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLOCKO15516 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CLOCKO15516 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLOCKO15516 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLOCKO15516 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CLOCKO15516 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.41□□□□□ -0.1
CLOCKO15516 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CLOCKO15516 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLOCKO15516 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.41□□□□□ -0.1
CLOCKO15516 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLOCKO15516 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
CLOCKO15516 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLOCKO15516 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.41□□□□□ -0.1
CLOCKO15516 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CLOCKO15516 TUBB3P1-201ENST00000405796 1332 ntBASIC14.41□□□□□ -0.1
CLOCKO15516 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLOCKO15516 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CLOCKO15516 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.4□□□□□ -0.1
CLOCKO15516 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLOCKO15516 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLOCKO15516 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
CLOCKO15516 AC138969.3-201ENST00000546612 1459 ntBASIC14.4□□□□□ -0.1
CLOCKO15516 AC138932.2-201ENST00000548268 1459 ntBASIC14.4□□□□□ -0.1
CLOCKO15516 AC126755.4-201ENST00000549796 1459 ntBASIC14.4□□□□□ -0.1
CLOCKO15516 AC012508.2-201ENST00000567613 1472 ntBASIC14.4□□□□□ -0.1
CLOCKO15516 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLOCKO15516 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.4□□□□□ -0.1
CLOCKO15516 TCAF1P1-201ENST00000414990 2232 ntBASIC14.4□□□□□ -0.1
CLOCKO15516 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.4□□□□□ -0.1
CLOCKO15516 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
CLOCKO15516 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLOCKO15516 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.4□□□□□ -0.1
CLOCKO15516 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLOCKO15516 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.4□□□□□ -0.1
CLOCKO15516 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.4□□□□□ -0.1
CLOCKO15516 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.4□□□□□ -0.1
CLOCKO15516 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.4□□□□□ -0.1
CLOCKO15516 MIR6080-201ENST00000617359 66 ntBASIC14.4□□□□□ -0.1
CLOCKO15516 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.4□□□□□ -0.1
CLOCKO15516 COL6A4P2-202ENST00000504443 2753 ntBASIC14.4□□□□□ -0.1
CLOCKO15516 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CLOCKO15516 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CLOCKO15516 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLOCKO15516 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.4□□□□□ -0.1
CLOCKO15516 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
CLOCKO15516 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.4□□□□□ -0.1
CLOCKO15516 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.4□□□□□ -0.1
CLOCKO15516 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLOCKO15516 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.4□□□□□ -0.1
CLOCKO15516 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.4□□□□□ -0.1
CLOCKO15516 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLOCKO15516 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLOCKO15516 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.4□□□□□ -0.1
CLOCKO15516 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLOCKO15516 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLOCKO15516 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
CLOCKO15516 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLOCKO15516 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.39□□□□□ -0.11
CLOCKO15516 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CLOCKO15516 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLOCKO15516 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.39□□□□□ -0.11
CLOCKO15516 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLOCKO15516 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLOCKO15516 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLOCKO15516 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLOCKO15516 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLOCKO15516 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLOCKO15516 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLOCKO15516 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLOCKO15516 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.39□□□□□ -0.11
CLOCKO15516 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLOCKO15516 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLOCKO15516 DGCR9-201ENST00000609630 2415 ntBASIC14.39□□□□□ -0.11
CLOCKO15516 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CLOCKO15516 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms