Protein–RNA interactions for Protein: O15260

SURF4, Surfeit locus protein 4, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4O15260 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SURF4O15260 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SURF4O15260 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SURF4O15260 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SURF4O15260 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SURF4O15260 MST1P2-201ENST00000457982 2291 ntBASIC13.64□□□□□ -0.23
SURF4O15260 AGGF1P1-201ENST00000509500 2073 ntBASIC13.64□□□□□ -0.23
SURF4O15260 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SURF4O15260 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.64□□□□□ -0.23
SURF4O15260 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SURF4O15260 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SURF4O15260 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SURF4O15260 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.64□□□□□ -0.23
SURF4O15260 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SURF4O15260 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.64□□□□□ -0.23
SURF4O15260 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SURF4O15260 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.64□□□□□ -0.23
SURF4O15260 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SURF4O15260 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
SURF4O15260 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.64□□□□□ -0.23
SURF4O15260 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.64□□□□□ -0.23
SURF4O15260 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SURF4O15260 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.64□□□□□ -0.23
SURF4O15260 AC027796.2-201ENST00000575326 344 ntBASIC13.64□□□□□ -0.23
SURF4O15260 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.64□□□□□ -0.23
SURF4O15260 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.64□□□□□ -0.23
SURF4O15260 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SURF4O15260 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SURF4O15260 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SURF4O15260 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.64□□□□□ -0.23
SURF4O15260 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SURF4O15260 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SURF4O15260 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SURF4O15260 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SURF4O15260 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SURF4O15260 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SURF4O15260 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SURF4O15260 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.64□□□□□ -0.23
SURF4O15260 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
SURF4O15260 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SURF4O15260 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SURF4O15260 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.64□□□□□ -0.23
SURF4O15260 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.64□□□□□ -0.23
SURF4O15260 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SURF4O15260 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SURF4O15260 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
SURF4O15260 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SURF4O15260 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SURF4O15260 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SURF4O15260 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
SURF4O15260 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
SURF4O15260 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SURF4O15260 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
SURF4O15260 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SURF4O15260 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SURF4O15260 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.63□□□□□ -0.23
SURF4O15260 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
SURF4O15260 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.63□□□□□ -0.23
SURF4O15260 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SURF4O15260 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SURF4O15260 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SURF4O15260 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SURF4O15260 MBLAC2-202ENST00000514906 1936 ntBASIC13.63□□□□□ -0.23
SURF4O15260 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SURF4O15260 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SURF4O15260 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
SURF4O15260 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SURF4O15260 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
SURF4O15260 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.63□□□□□ -0.23
SURF4O15260 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SURF4O15260 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SURF4O15260 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SURF4O15260 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
SURF4O15260 HLA-K-203ENST00000430151 1046 ntBASIC13.63□□□□□ -0.23
SURF4O15260 AC055876.3-201ENST00000431496 288 ntBASIC13.63□□□□□ -0.23
SURF4O15260 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.63□□□□□ -0.23
SURF4O15260 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SURF4O15260 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.63□□□□□ -0.23
SURF4O15260 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.63□□□□□ -0.23
SURF4O15260 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.63□□□□□ -0.23
SURF4O15260 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.63□□□□□ -0.23
SURF4O15260 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.63□□□□□ -0.23
SURF4O15260 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SURF4O15260 AC138649.4-201ENST00000612222 287 ntBASIC13.63□□□□□ -0.23
SURF4O15260 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.63□□□□□ -0.23
SURF4O15260 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.63□□□□□ -0.23
SURF4O15260 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
SURF4O15260 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SURF4O15260 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SURF4O15260 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
SURF4O15260 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.63□□□□□ -0.23
SURF4O15260 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.63□□□□□ -0.23
SURF4O15260 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.63□□□□□ -0.23
SURF4O15260 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
SURF4O15260 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SURF4O15260 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SURF4O15260 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
SURF4O15260 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.63□□□□□ -0.23
SURF4O15260 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.63□□□□□ -0.23
SURF4O15260 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms