Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC138761.1-201ENST00000584393 385 ntBASIC16.1■□□□□ 0.17
FOXN3O00409 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.1■□□□□ 0.17
FOXN3O00409 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.1■□□□□ 0.17
FOXN3O00409 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXN3O00409 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
FOXN3O00409 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.1■□□□□ 0.17
FOXN3O00409 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXN3O00409 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
FOXN3O00409 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
FOXN3O00409 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.1■□□□□ 0.17
FOXN3O00409 AC015802.1-201ENST00000588104 1449 ntBASIC16.1■□□□□ 0.17
FOXN3O00409 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
FOXN3O00409 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.09■□□□□ 0.17
FOXN3O00409 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXN3O00409 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FOXN3O00409 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.09■□□□□ 0.17
FOXN3O00409 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXN3O00409 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXN3O00409 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXN3O00409 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FOXN3O00409 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FOXN3O00409 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.09■□□□□ 0.17
FOXN3O00409 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXN3O00409 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FOXN3O00409 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.09■□□□□ 0.17
FOXN3O00409 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXN3O00409 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXN3O00409 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.09■□□□□ 0.17
FOXN3O00409 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
FOXN3O00409 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.09■□□□□ 0.17
FOXN3O00409 FO681548.1-201ENST00000455617 1132 ntBASIC16.09■□□□□ 0.17
FOXN3O00409 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.09■□□□□ 0.17
FOXN3O00409 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FOXN3O00409 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.09■□□□□ 0.17
FOXN3O00409 AC009486.1-201ENST00000569860 813 ntBASIC16.09■□□□□ 0.17
FOXN3O00409 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
FOXN3O00409 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXN3O00409 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
FOXN3O00409 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.09■□□□□ 0.17
FOXN3O00409 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXN3O00409 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXN3O00409 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXN3O00409 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.09■□□□□ 0.17
FOXN3O00409 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FOXN3O00409 LINC01230-201ENST00000625222 3017 ntBASIC16.09■□□□□ 0.17
FOXN3O00409 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXN3O00409 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FOXN3O00409 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXN3O00409 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXN3O00409 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXN3O00409 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXN3O00409 AC003102.2-201ENST00000589195 1469 ntBASIC16.09■□□□□ 0.17
FOXN3O00409 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC16.09■□□□□ 0.17
FOXN3O00409 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
FOXN3O00409 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
FOXN3O00409 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
FOXN3O00409 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC16.09■□□□□ 0.17
FOXN3O00409 RDX-218ENST00000544551 4117 ntTSL 2 BASIC16.09■□□□□ 0.17
FOXN3O00409 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
FOXN3O00409 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
FOXN3O00409 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.08■□□□□ 0.17
FOXN3O00409 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.08■□□□□ 0.17
FOXN3O00409 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC16.08■□□□□ 0.17
FOXN3O00409 SALL4P5-201ENST00000419001 1760 ntBASIC16.08■□□□□ 0.17
FOXN3O00409 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.17
FOXN3O00409 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
FOXN3O00409 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
FOXN3O00409 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
FOXN3O00409 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.08■□□□□ 0.17
FOXN3O00409 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
FOXN3O00409 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXN3O00409 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXN3O00409 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXN3O00409 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC16.08■□□□□ 0.16
FOXN3O00409 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
FOXN3O00409 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
FOXN3O00409 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXN3O00409 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXN3O00409 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.08■□□□□ 0.16
FOXN3O00409 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
FOXN3O00409 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXN3O00409 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXN3O00409 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXN3O00409 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.08■□□□□ 0.16
FOXN3O00409 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
FOXN3O00409 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
FOXN3O00409 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXN3O00409 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXN3O00409 ACTG1P3-201ENST00000431775 1114 ntBASIC16.08■□□□□ 0.16
FOXN3O00409 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXN3O00409 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
FOXN3O00409 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.08■□□□□ 0.16
FOXN3O00409 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.08■□□□□ 0.16
FOXN3O00409 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
FOXN3O00409 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXN3O00409 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
FOXN3O00409 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXN3O00409 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXN3O00409 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FOXN3O00409 AC027601.5-201ENST00000624065 2482 ntBASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms