Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.08■□□□□ 0
PCDHB1Q9Y5F3 C2orf69P2-201ENST00000562032 1123 ntBASIC15.08■□□□□ 0
PCDHB1Q9Y5F3 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.08■□□□□ 0
PCDHB1Q9Y5F3 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.08■□□□□ 0
PCDHB1Q9Y5F3 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
PCDHB1Q9Y5F3 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.08■□□□□ 0
PCDHB1Q9Y5F3 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.08■□□□□ 0
PCDHB1Q9Y5F3 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PCDHB1Q9Y5F3 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.08■□□□□ 0
PCDHB1Q9Y5F3 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.08■□□□□ 0
PCDHB1Q9Y5F3 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.08■□□□□ 0
PCDHB1Q9Y5F3 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
PCDHB1Q9Y5F3 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.08■□□□□ 0
PCDHB1Q9Y5F3 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PCDHB1Q9Y5F3 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
PCDHB1Q9Y5F3 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.08■□□□□ 0
PCDHB1Q9Y5F3 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHB1Q9Y5F3 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.07■□□□□ 0
PCDHB1Q9Y5F3 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHB1Q9Y5F3 AL157414.3-201ENST00000624276 1954 ntBASIC15.07■□□□□ 0
PCDHB1Q9Y5F3 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHB1Q9Y5F3 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.07■□□□□ 0
PCDHB1Q9Y5F3 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
PCDHB1Q9Y5F3 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHB1Q9Y5F3 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
PCDHB1Q9Y5F3 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.07■□□□□ 0
PCDHB1Q9Y5F3 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHB1Q9Y5F3 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.07■□□□□ 0
PCDHB1Q9Y5F3 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHB1Q9Y5F3 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHB1Q9Y5F3 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHB1Q9Y5F3 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHB1Q9Y5F3 AL139094.1-201ENST00000405549 1188 ntBASIC15.07■□□□□ 0
PCDHB1Q9Y5F3 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHB1Q9Y5F3 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.07■□□□□ 0
PCDHB1Q9Y5F3 AP001582.1-201ENST00000525856 295 ntBASIC15.07■□□□□ 0
PCDHB1Q9Y5F3 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.07■□□□□ 0
PCDHB1Q9Y5F3 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.07■□□□□ 0
PCDHB1Q9Y5F3 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
PCDHB1Q9Y5F3 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.07■□□□□ 0
PCDHB1Q9Y5F3 RHOXF1P1-202ENST00000635473 501 ntBASIC15.07■□□□□ 0
PCDHB1Q9Y5F3 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHB1Q9Y5F3 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
PCDHB1Q9Y5F3 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHB1Q9Y5F3 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHB1Q9Y5F3 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.07■□□□□ 0
PCDHB1Q9Y5F3 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHB1Q9Y5F3 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.07■□□□□ 0
PCDHB1Q9Y5F3 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.07■□□□□ 0
PCDHB1Q9Y5F3 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
PCDHB1Q9Y5F3 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
PCDHB1Q9Y5F3 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
PCDHB1Q9Y5F3 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.07■□□□□ 0
PCDHB1Q9Y5F3 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
PCDHB1Q9Y5F3 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 REXO1L5P-201ENST00000622260 2098 ntBASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 HLA-DPB2-205ENST00000435074 1188 ntBASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 AC114812.1-204ENST00000449669 728 ntBASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 AC079316.1-201ENST00000548397 411 ntBASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 AP001063.1-201ENST00000568332 529 ntBASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 AL118558.3-201ENST00000607414 1079 ntBASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 AL603764.1-201ENST00000636452 321 ntBASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 KRT8P14-201ENST00000414254 1442 ntBASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
PCDHB1Q9Y5F3 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms