Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 AC004945.1-201ENST00000416738 983 ntBASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 AC100850.1-201ENST00000506768 649 ntBASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 IGHV3OR16-16-201ENST00000563644 343 ntBASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 AL136301.1-201ENST00000615830 422 ntBASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CTDP1Q9Y5B0 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC17.37■□□□□ 0.37
CTDP1Q9Y5B0 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CTDP1Q9Y5B0 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTDP1Q9Y5B0 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTDP1Q9Y5B0 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTDP1Q9Y5B0 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CTDP1Q9Y5B0 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
CTDP1Q9Y5B0 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
CTDP1Q9Y5B0 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
CTDP1Q9Y5B0 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
CTDP1Q9Y5B0 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC17.37■□□□□ 0.37
CTDP1Q9Y5B0 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.37■□□□□ 0.37
CTDP1Q9Y5B0 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTDP1Q9Y5B0 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC17.37■□□□□ 0.37
CTDP1Q9Y5B0 CHMP1AP1-201ENST00000445563 662 ntBASIC17.37■□□□□ 0.37
CTDP1Q9Y5B0 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTDP1Q9Y5B0 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC17.37■□□□□ 0.37
CTDP1Q9Y5B0 AP003171.2-201ENST00000528208 925 ntBASIC17.37■□□□□ 0.37
CTDP1Q9Y5B0 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CTDP1Q9Y5B0 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC17.37■□□□□ 0.37
CTDP1Q9Y5B0 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC17.37■□□□□ 0.37
CTDP1Q9Y5B0 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTDP1Q9Y5B0 AL451050.2-201ENST00000606967 682 ntBASIC17.37■□□□□ 0.37
CTDP1Q9Y5B0 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC17.37■□□□□ 0.37
CTDP1Q9Y5B0 AC002472.3-201ENST00000640124 621 ntBASIC17.37■□□□□ 0.37
CTDP1Q9Y5B0 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTDP1Q9Y5B0 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTDP1Q9Y5B0 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.37■□□□□ 0.37
CTDP1Q9Y5B0 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
CTDP1Q9Y5B0 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC17.37■□□□□ 0.37
CTDP1Q9Y5B0 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTDP1Q9Y5B0 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTDP1Q9Y5B0 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTDP1Q9Y5B0 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTDP1Q9Y5B0 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.37■□□□□ 0.37
CTDP1Q9Y5B0 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.37■□□□□ 0.37
CTDP1Q9Y5B0 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTDP1Q9Y5B0 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.37■□□□□ 0.37
CTDP1Q9Y5B0 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CTDP1Q9Y5B0 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CTDP1Q9Y5B0 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTDP1Q9Y5B0 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.36■□□□□ 0.37
CTDP1Q9Y5B0 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTDP1Q9Y5B0 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTDP1Q9Y5B0 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTDP1Q9Y5B0 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTDP1Q9Y5B0 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTDP1Q9Y5B0 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTDP1Q9Y5B0 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTDP1Q9Y5B0 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTDP1Q9Y5B0 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC17.36■□□□□ 0.37
CTDP1Q9Y5B0 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CTDP1Q9Y5B0 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTDP1Q9Y5B0 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTDP1Q9Y5B0 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTDP1Q9Y5B0 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC17.36■□□□□ 0.37
CTDP1Q9Y5B0 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTDP1Q9Y5B0 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTDP1Q9Y5B0 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.36■□□□□ 0.37
CTDP1Q9Y5B0 CDC23-208ENST00000505120 455 ntTSL 3 BASIC17.36■□□□□ 0.37
CTDP1Q9Y5B0 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17.36■□□□□ 0.37
CTDP1Q9Y5B0 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.36■□□□□ 0.37
CTDP1Q9Y5B0 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CTDP1Q9Y5B0 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTDP1Q9Y5B0 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTDP1Q9Y5B0 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC17.36■□□□□ 0.37
CTDP1Q9Y5B0 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTDP1Q9Y5B0 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CTDP1Q9Y5B0 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTDP1Q9Y5B0 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTDP1Q9Y5B0 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTDP1Q9Y5B0 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTDP1Q9Y5B0 OR2I1P-210ENST00000642037 4691 ntBASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms