Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 KRT8P22-201ENST00000562317 1415 ntBASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 IMP4-203ENST00000409935 958 ntTSL 5 BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 GPS2P2-201ENST00000430745 888 ntBASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 CEND1P1-201ENST00000451006 455 ntBASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 AC026150.2-201ENST00000564693 1156 ntBASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 MTDHP5-201ENST00000598980 586 ntBASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 AC074044.1-201ENST00000609673 707 ntBASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 AL157414.3-201ENST00000624276 1954 ntBASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC10.53□□□□□ -0.72
UBE2D4Q9Y2X8 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
UBE2D4Q9Y2X8 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.72
UBE2D4Q9Y2X8 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
UBE2D4Q9Y2X8 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC10.52□□□□□ -0.72
UBE2D4Q9Y2X8 PTENP1-202ENST00000532280 3996 ntBASIC10.52□□□□□ -0.72
UBE2D4Q9Y2X8 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC10.52□□□□□ -0.72
UBE2D4Q9Y2X8 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC10.52□□□□□ -0.72
UBE2D4Q9Y2X8 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
UBE2D4Q9Y2X8 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
UBE2D4Q9Y2X8 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
UBE2D4Q9Y2X8 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC10.52□□□□□ -0.72
UBE2D4Q9Y2X8 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC10.52□□□□□ -0.72
UBE2D4Q9Y2X8 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC10.52□□□□□ -0.72
UBE2D4Q9Y2X8 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 AC079781.5-202ENST00000641784 3743 ntBASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 PMP22-202ENST00000395936 816 ntTSL 3 BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC10.52□□□□□ -0.73
UBE2D4Q9Y2X8 MIR4453-201ENST00000584019 89 ntBASIC10.52□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms