Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL20A1Q9P218 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
COL20A1Q9P218 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL20A1Q9P218 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.85■□□□□ 0.29
COL20A1Q9P218 SLC16A6P1-201ENST00000413214 1059 ntBASIC16.85■□□□□ 0.29
COL20A1Q9P218 AL157407.1-201ENST00000435784 904 ntBASIC16.85■□□□□ 0.29
COL20A1Q9P218 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.85■□□□□ 0.29
COL20A1Q9P218 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC16.85■□□□□ 0.29
COL20A1Q9P218 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.85■□□□□ 0.29
COL20A1Q9P218 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC16.85■□□□□ 0.29
COL20A1Q9P218 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL20A1Q9P218 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC16.85■□□□□ 0.29
COL20A1Q9P218 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.85■□□□□ 0.29
COL20A1Q9P218 AC097724.1-201ENST00000609581 426 ntBASIC16.85■□□□□ 0.29
COL20A1Q9P218 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL20A1Q9P218 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL20A1Q9P218 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.85■□□□□ 0.29
COL20A1Q9P218 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL20A1Q9P218 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.85■□□□□ 0.29
COL20A1Q9P218 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL20A1Q9P218 FAM90A7P-201ENST00000382628 1395 ntBASIC16.85■□□□□ 0.29
COL20A1Q9P218 FAM90A23P-201ENST00000400136 1395 ntBASIC16.85■□□□□ 0.29
COL20A1Q9P218 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL20A1Q9P218 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL20A1Q9P218 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL20A1Q9P218 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL20A1Q9P218 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL20A1Q9P218 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
COL20A1Q9P218 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL20A1Q9P218 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL20A1Q9P218 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL20A1Q9P218 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.85■□□□□ 0.29
COL20A1Q9P218 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL20A1Q9P218 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL20A1Q9P218 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL20A1Q9P218 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL20A1Q9P218 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL20A1Q9P218 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL20A1Q9P218 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.84■□□□□ 0.29
COL20A1Q9P218 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL20A1Q9P218 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL20A1Q9P218 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL20A1Q9P218 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL20A1Q9P218 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL20A1Q9P218 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL20A1Q9P218 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
COL20A1Q9P218 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL20A1Q9P218 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL20A1Q9P218 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.84■□□□□ 0.29
COL20A1Q9P218 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL20A1Q9P218 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL20A1Q9P218 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL20A1Q9P218 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL20A1Q9P218 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL20A1Q9P218 CMC1-204ENST00000423894 549 ntTSL 2 BASIC16.84■□□□□ 0.29
COL20A1Q9P218 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC16.84■□□□□ 0.29
COL20A1Q9P218 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
COL20A1Q9P218 AC105129.2-201ENST00000559536 390 ntBASIC16.84■□□□□ 0.29
COL20A1Q9P218 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL20A1Q9P218 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL20A1Q9P218 AC084346.2-201ENST00000607097 949 ntBASIC16.84■□□□□ 0.29
COL20A1Q9P218 AP001505.2-201ENST00000616815 443 ntBASIC16.84■□□□□ 0.29
COL20A1Q9P218 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.84■□□□□ 0.29
COL20A1Q9P218 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL20A1Q9P218 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL20A1Q9P218 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL20A1Q9P218 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL20A1Q9P218 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL20A1Q9P218 AC008132.1-202ENST00000342005 1389 ntBASIC16.84■□□□□ 0.29
COL20A1Q9P218 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
COL20A1Q9P218 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
COL20A1Q9P218 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL20A1Q9P218 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
COL20A1Q9P218 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
COL20A1Q9P218 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.84■□□□□ 0.29
COL20A1Q9P218 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL20A1Q9P218 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
COL20A1Q9P218 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL20A1Q9P218 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL20A1Q9P218 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
COL20A1Q9P218 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.84■□□□□ 0.29
COL20A1Q9P218 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
COL20A1Q9P218 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.84■□□□□ 0.29
COL20A1Q9P218 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.84■□□□□ 0.29
COL20A1Q9P218 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL20A1Q9P218 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
COL20A1Q9P218 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
COL20A1Q9P218 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
COL20A1Q9P218 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
COL20A1Q9P218 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
COL20A1Q9P218 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL20A1Q9P218 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
COL20A1Q9P218 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL20A1Q9P218 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL20A1Q9P218 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL20A1Q9P218 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
COL20A1Q9P218 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
COL20A1Q9P218 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COL20A1Q9P218 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
COL20A1Q9P218 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms