Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BLOC1S4Q9NUP1 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
BLOC1S4Q9NUP1 TPM3P8-201ENST00000330554 643 ntBASIC16.67■□□□□ 0.26
BLOC1S4Q9NUP1 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BLOC1S4Q9NUP1 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BLOC1S4Q9NUP1 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.67■□□□□ 0.26
BLOC1S4Q9NUP1 U91328.1-201ENST00000437528 223 ntBASIC16.67■□□□□ 0.26
BLOC1S4Q9NUP1 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
BLOC1S4Q9NUP1 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
BLOC1S4Q9NUP1 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BLOC1S4Q9NUP1 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.67■□□□□ 0.26
BLOC1S4Q9NUP1 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BLOC1S4Q9NUP1 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.67■□□□□ 0.26
BLOC1S4Q9NUP1 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.67■□□□□ 0.26
BLOC1S4Q9NUP1 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
BLOC1S4Q9NUP1 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BLOC1S4Q9NUP1 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
BLOC1S4Q9NUP1 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
BLOC1S4Q9NUP1 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.67■□□□□ 0.26
BLOC1S4Q9NUP1 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BLOC1S4Q9NUP1 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BLOC1S4Q9NUP1 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BLOC1S4Q9NUP1 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BLOC1S4Q9NUP1 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BLOC1S4Q9NUP1 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.67■□□□□ 0.26
BLOC1S4Q9NUP1 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
BLOC1S4Q9NUP1 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
BLOC1S4Q9NUP1 AC068418.2-201ENST00000577309 3703 ntBASIC16.67■□□□□ 0.26
BLOC1S4Q9NUP1 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.66■□□□□ 0.26
BLOC1S4Q9NUP1 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
BLOC1S4Q9NUP1 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BLOC1S4Q9NUP1 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BLOC1S4Q9NUP1 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
BLOC1S4Q9NUP1 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
BLOC1S4Q9NUP1 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
BLOC1S4Q9NUP1 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
BLOC1S4Q9NUP1 AC079776.1-201ENST00000401540 1152 ntBASIC16.66■□□□□ 0.26
BLOC1S4Q9NUP1 RN7SKP175-201ENST00000408472 289 ntBASIC16.66■□□□□ 0.26
BLOC1S4Q9NUP1 ARSEP1-201ENST00000420443 635 ntBASIC16.66■□□□□ 0.26
BLOC1S4Q9NUP1 C2orf27AP3-201ENST00000434123 579 ntBASIC16.66■□□□□ 0.26
BLOC1S4Q9NUP1 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.66■□□□□ 0.26
BLOC1S4Q9NUP1 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BLOC1S4Q9NUP1 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.66■□□□□ 0.26
BLOC1S4Q9NUP1 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.66■□□□□ 0.26
BLOC1S4Q9NUP1 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.66■□□□□ 0.26
BLOC1S4Q9NUP1 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BLOC1S4Q9NUP1 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.66■□□□□ 0.26
BLOC1S4Q9NUP1 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.66■□□□□ 0.26
BLOC1S4Q9NUP1 AC015802.1-201ENST00000588104 1449 ntBASIC16.66■□□□□ 0.26
BLOC1S4Q9NUP1 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BLOC1S4Q9NUP1 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
BLOC1S4Q9NUP1 AL354718.3-201ENST00000616414 581 ntBASIC16.66■□□□□ 0.26
BLOC1S4Q9NUP1 CR382287.1-201ENST00000623954 586 ntBASIC16.66■□□□□ 0.26
BLOC1S4Q9NUP1 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.66■□□□□ 0.26
BLOC1S4Q9NUP1 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
BLOC1S4Q9NUP1 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
BLOC1S4Q9NUP1 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BLOC1S4Q9NUP1 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BLOC1S4Q9NUP1 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
BLOC1S4Q9NUP1 AGGF1P1-201ENST00000509500 2073 ntBASIC16.66■□□□□ 0.26
BLOC1S4Q9NUP1 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
BLOC1S4Q9NUP1 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BLOC1S4Q9NUP1 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
BLOC1S4Q9NUP1 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.66■□□□□ 0.26
BLOC1S4Q9NUP1 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.66■□□□□ 0.26
BLOC1S4Q9NUP1 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 AC006001.1-201ENST00000325130 474 ntBASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 TPT1P11-201ENST00000458482 498 ntBASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 AC106886.1-201ENST00000568660 600 ntBASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BLOC1S4Q9NUP1 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms