Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDH20Q9HBT6 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 KRT8P35-201ENST00000483942 1338 ntBASIC13.23□□□□□ -0.29
CDH20Q9HBT6 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 AC134312.5-201ENST00000568031 1313 ntBASIC13.23□□□□□ -0.29
CDH20Q9HBT6 AL360270.3-201ENST00000609118 1348 ntBASIC13.23□□□□□ -0.29
CDH20Q9HBT6 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 CR383656.12-201ENST00000549567 513 ntBASIC13.23□□□□□ -0.29
CDH20Q9HBT6 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.23□□□□□ -0.29
CDH20Q9HBT6 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.22□□□□□ -0.29
CDH20Q9HBT6 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms