Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
EFCC1Q9HA90 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC17.54■□□□□ 0.4
EFCC1Q9HA90 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EFCC1Q9HA90 USP31-203ENST00000567975 2142 ntTSL 2 BASIC17.54■□□□□ 0.4
EFCC1Q9HA90 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EFCC1Q9HA90 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.54■□□□□ 0.4
EFCC1Q9HA90 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
EFCC1Q9HA90 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.54■□□□□ 0.4
EFCC1Q9HA90 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC17.54■□□□□ 0.4
EFCC1Q9HA90 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
EFCC1Q9HA90 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
EFCC1Q9HA90 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EFCC1Q9HA90 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EFCC1Q9HA90 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
EFCC1Q9HA90 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
EFCC1Q9HA90 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.54■□□□□ 0.4
EFCC1Q9HA90 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
EFCC1Q9HA90 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EFCC1Q9HA90 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EFCC1Q9HA90 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
EFCC1Q9HA90 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.54■□□□□ 0.4
EFCC1Q9HA90 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC17.54■□□□□ 0.4
EFCC1Q9HA90 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC17.54■□□□□ 0.4
EFCC1Q9HA90 AL353637.1-201ENST00000451571 732 ntBASIC17.54■□□□□ 0.4
EFCC1Q9HA90 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC17.54■□□□□ 0.4
EFCC1Q9HA90 CEP164P1-201ENST00000455142 418 ntBASIC17.54■□□□□ 0.4
EFCC1Q9HA90 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.54■□□□□ 0.4
EFCC1Q9HA90 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC17.54■□□□□ 0.4
EFCC1Q9HA90 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC17.54■□□□□ 0.4
EFCC1Q9HA90 AP003171.2-201ENST00000528208 925 ntBASIC17.54■□□□□ 0.4
EFCC1Q9HA90 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC17.54■□□□□ 0.4
EFCC1Q9HA90 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.54■□□□□ 0.4
EFCC1Q9HA90 AC012044.1-201ENST00000603431 297 ntBASIC17.54■□□□□ 0.4
EFCC1Q9HA90 AC004923.1-202ENST00000642106 209 ntBASIC17.54■□□□□ 0.4
EFCC1Q9HA90 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EFCC1Q9HA90 GRK6P1-201ENST00000400595 1711 ntBASIC17.54■□□□□ 0.4
EFCC1Q9HA90 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EFCC1Q9HA90 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
EFCC1Q9HA90 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC17.54■□□□□ 0.4
EFCC1Q9HA90 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
EFCC1Q9HA90 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
EFCC1Q9HA90 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
EFCC1Q9HA90 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
EFCC1Q9HA90 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
EFCC1Q9HA90 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.54■□□□□ 0.4
EFCC1Q9HA90 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
EFCC1Q9HA90 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
EFCC1Q9HA90 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 AL157791.1-201ENST00000553667 1699 ntBASIC17.53■□□□□ 0.4
EFCC1Q9HA90 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 RPSAP31-201ENST00000416648 895 ntBASIC17.53■□□□□ 0.4
EFCC1Q9HA90 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 RNMTL1P1-201ENST00000454103 560 ntBASIC17.53■□□□□ 0.4
EFCC1Q9HA90 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 AC004066.1-201ENST00000502488 802 ntBASIC17.53■□□□□ 0.4
EFCC1Q9HA90 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 WDR7-208ENST00000589935 544 ntTSL 4 BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 BNIP3P13-201ENST00000599968 566 ntBASIC17.53■□□□□ 0.4
EFCC1Q9HA90 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 AC006453.1-201ENST00000636037 1257 ntBASIC17.53■□□□□ 0.4
EFCC1Q9HA90 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
EFCC1Q9HA90 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms