Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 AL928921.2-201ENST00000641325 2442 ntBASIC14□□□□□ -0.17
POLR2J2Q9GZM3 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 AC097359.2-201ENST00000604992 2389 ntBASIC14□□□□□ -0.17
POLR2J2Q9GZM3 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14□□□□□ -0.17
POLR2J2Q9GZM3 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 MTHFR-210ENST00000641407 2387 ntBASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 AL391069.4-201ENST00000609583 481 ntBASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 AL158212.4-201ENST00000624062 1286 ntBASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
POLR2J2Q9GZM3 AC100757.3-201ENST00000622361 1406 ntBASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.98□□□□□ -0.17
POLR2J2Q9GZM3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms