Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 AC023906.1-201ENST00000486386 453 ntBASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 CHCHD2P2-201ENST00000503744 321 ntBASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 GAPDHP40-201ENST00000505218 1006 ntBASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 HCG18-241ENST00000602290 821 ntTSL 2 BASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 AC011471.3-201ENST00000623576 402 ntBASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 AC132872.4-202ENST00000622924 2756 ntBASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 REXO1L1P-202ENST00000608646 1974 ntBASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 SIGLEC20P-201ENST00000595243 1311 ntBASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CNTNAP3Q9BZ76 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CNTNAP3Q9BZ76 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
CNTNAP3Q9BZ76 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
CNTNAP3Q9BZ76 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.33□□□□□ -0.11
CNTNAP3Q9BZ76 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CNTNAP3Q9BZ76 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.33□□□□□ -0.11
CNTNAP3Q9BZ76 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CNTNAP3Q9BZ76 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CNTNAP3Q9BZ76 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.33□□□□□ -0.11
CNTNAP3Q9BZ76 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 AC105917.1-201ENST00000506637 2539 ntBASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 RPL14-203ENST00000416518 812 ntTSL 3 BASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 BCL2L12P1-201ENST00000508390 733 ntBASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 AC009779.1-201ENST00000551138 283 ntBASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 AC100827.2-201ENST00000563214 1194 ntBASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 AC254633.1-201ENST00000606790 345 ntBASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 AC005786.4-201ENST00000623369 682 ntBASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 AC110057.1-201ENST00000636031 898 ntBASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.33□□□□□ -0.12
CNTNAP3Q9BZ76 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CNTNAP3Q9BZ76 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms