Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 NAA50-208ENST00000497255 789 ntTSL 5 BASIC12.65□□□□□ -0.38
CCL13Q99616 AC026434.2-201ENST00000506094 1078 ntBASIC12.65□□□□□ -0.38
CCL13Q99616 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCL13Q99616 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC12.65□□□□□ -0.38
CCL13Q99616 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.65□□□□□ -0.38
CCL13Q99616 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC12.65□□□□□ -0.38
CCL13Q99616 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC12.65□□□□□ -0.38
CCL13Q99616 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC12.65□□□□□ -0.38
CCL13Q99616 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC12.65□□□□□ -0.38
CCL13Q99616 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL13Q99616 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.65□□□□□ -0.38
CCL13Q99616 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
CCL13Q99616 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
CCL13Q99616 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL13Q99616 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL13Q99616 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL13Q99616 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL13Q99616 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL13Q99616 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL13Q99616 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL13Q99616 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCL13Q99616 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCL13Q99616 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCL13Q99616 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC12.65□□□□□ -0.38
CCL13Q99616 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCL13Q99616 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL13Q99616 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.65□□□□□ -0.38
CCL13Q99616 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CCL13Q99616 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCL13Q99616 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CCL13Q99616 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
CCL13Q99616 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
CCL13Q99616 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
CCL13Q99616 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC12.64□□□□□ -0.39
CCL13Q99616 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL13Q99616 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC12.64□□□□□ -0.39
CCL13Q99616 TK2-221ENST00000620035 5060 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL13Q99616 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.64□□□□□ -0.39
CCL13Q99616 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL13Q99616 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCL13Q99616 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCL13Q99616 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL13Q99616 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL13Q99616 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CCL13Q99616 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL13Q99616 AC067750.1-201ENST00000608826 6545 ntBASIC12.64□□□□□ -0.39
CCL13Q99616 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL13Q99616 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL13Q99616 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL13Q99616 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC12.64□□□□□ -0.39
CCL13Q99616 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC12.64□□□□□ -0.39
CCL13Q99616 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCL13Q99616 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
CCL13Q99616 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
CCL13Q99616 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL13Q99616 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL13Q99616 ZBTB12BP-201ENST00000314232 1122 ntBASIC12.64□□□□□ -0.39
CCL13Q99616 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC12.64□□□□□ -0.39
CCL13Q99616 AC092933.1-201ENST00000393644 945 ntBASIC12.64□□□□□ -0.39
CCL13Q99616 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.64□□□□□ -0.39
CCL13Q99616 C2orf27AP3-201ENST00000434123 579 ntBASIC12.64□□□□□ -0.39
CCL13Q99616 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
CCL13Q99616 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC12.64□□□□□ -0.39
CCL13Q99616 CROCCP4-201ENST00000457096 498 ntBASIC12.64□□□□□ -0.39
CCL13Q99616 FTH1P14-201ENST00000482930 551 ntBASIC12.64□□□□□ -0.39
CCL13Q99616 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL13Q99616 KRT17P8-201ENST00000540749 863 ntBASIC12.64□□□□□ -0.39
CCL13Q99616 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC12.64□□□□□ -0.39
CCL13Q99616 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL13Q99616 DUX4L47-201ENST00000566374 394 ntBASIC12.64□□□□□ -0.39
CCL13Q99616 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.64□□□□□ -0.39
CCL13Q99616 AL354718.3-201ENST00000616414 581 ntBASIC12.64□□□□□ -0.39
CCL13Q99616 CR382287.1-201ENST00000623954 586 ntBASIC12.64□□□□□ -0.39
CCL13Q99616 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCL13Q99616 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL13Q99616 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL13Q99616 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CCL13Q99616 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL13Q99616 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC12.64□□□□□ -0.39
CCL13Q99616 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC12.64□□□□□ -0.39
CCL13Q99616 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CCL13Q99616 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
CCL13Q99616 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL13Q99616 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL13Q99616 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL13Q99616 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CCL13Q99616 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL13Q99616 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL13Q99616 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CCL13Q99616 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL13Q99616 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL13Q99616 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CCL13Q99616 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC12.64□□□□□ -0.39
CCL13Q99616 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CCL13Q99616 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CCL13Q99616 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CCL13Q99616 AL596257.1-201ENST00000641463 2694 ntBASIC12.64□□□□□ -0.39
CCL13Q99616 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC12.64□□□□□ -0.39
CCL13Q99616 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL13Q99616 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms