Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAB40CQ96S21 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB40CQ96S21 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB40CQ96S21 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAB40CQ96S21 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12.28□□□□□ -0.44
RAB40CQ96S21 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB40CQ96S21 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
RAB40CQ96S21 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAB40CQ96S21 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
RAB40CQ96S21 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB40CQ96S21 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.28□□□□□ -0.44
RAB40CQ96S21 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
RAB40CQ96S21 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
RAB40CQ96S21 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB40CQ96S21 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB40CQ96S21 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB40CQ96S21 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
RAB40CQ96S21 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB40CQ96S21 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAB40CQ96S21 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAB40CQ96S21 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
RAB40CQ96S21 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC12.28□□□□□ -0.44
RAB40CQ96S21 SPCS2P4-201ENST00000436160 681 ntBASIC12.28□□□□□ -0.44
RAB40CQ96S21 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB40CQ96S21 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC12.28□□□□□ -0.44
RAB40CQ96S21 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAB40CQ96S21 PGAM5P1-201ENST00000518923 814 ntBASIC12.28□□□□□ -0.44
RAB40CQ96S21 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.28□□□□□ -0.44
RAB40CQ96S21 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC12.28□□□□□ -0.44
RAB40CQ96S21 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAB40CQ96S21 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAB40CQ96S21 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB40CQ96S21 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
RAB40CQ96S21 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
RAB40CQ96S21 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
RAB40CQ96S21 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB40CQ96S21 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB40CQ96S21 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB40CQ96S21 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB40CQ96S21 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.28□□□□□ -0.44
RAB40CQ96S21 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.28□□□□□ -0.44
RAB40CQ96S21 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
RAB40CQ96S21 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
RAB40CQ96S21 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB40CQ96S21 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.28□□□□□ -0.44
RAB40CQ96S21 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB40CQ96S21 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
RAB40CQ96S21 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
RAB40CQ96S21 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
RAB40CQ96S21 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
RAB40CQ96S21 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
RAB40CQ96S21 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RAB40CQ96S21 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RAB40CQ96S21 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
RAB40CQ96S21 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.27□□□□□ -0.44
RAB40CQ96S21 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
RAB40CQ96S21 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.27□□□□□ -0.44
RAB40CQ96S21 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
RAB40CQ96S21 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
RAB40CQ96S21 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.27□□□□□ -0.44
RAB40CQ96S21 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
RAB40CQ96S21 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
RAB40CQ96S21 KRT8P24-201ENST00000560290 1559 ntBASIC12.27□□□□□ -0.44
RAB40CQ96S21 AC016397.2-201ENST00000624848 1985 ntBASIC12.27□□□□□ -0.44
RAB40CQ96S21 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
RAB40CQ96S21 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
RAB40CQ96S21 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
RAB40CQ96S21 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB40CQ96S21 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.27□□□□□ -0.45
RAB40CQ96S21 AGGF1P1-201ENST00000509500 2073 ntBASIC12.27□□□□□ -0.45
RAB40CQ96S21 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB40CQ96S21 AL731571.1-201ENST00000617058 5428 ntBASIC12.27□□□□□ -0.45
RAB40CQ96S21 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
RAB40CQ96S21 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB40CQ96S21 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB40CQ96S21 RPS19-201ENST00000221975 500 ntTSL 3 BASIC12.27□□□□□ -0.45
RAB40CQ96S21 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB40CQ96S21 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB40CQ96S21 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RAB40CQ96S21 PMP22-202ENST00000395936 816 ntTSL 3 BASIC12.27□□□□□ -0.45
RAB40CQ96S21 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
RAB40CQ96S21 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC12.27□□□□□ -0.45
RAB40CQ96S21 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB40CQ96S21 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC12.27□□□□□ -0.45
RAB40CQ96S21 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.27□□□□□ -0.45
RAB40CQ96S21 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC12.27□□□□□ -0.45
RAB40CQ96S21 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
RAB40CQ96S21 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
RAB40CQ96S21 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RAB40CQ96S21 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC12.27□□□□□ -0.45
RAB40CQ96S21 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
RAB40CQ96S21 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
RAB40CQ96S21 AC105021.1-202ENST00000570572 669 ntBASIC12.27□□□□□ -0.45
RAB40CQ96S21 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.27□□□□□ -0.45
RAB40CQ96S21 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC12.27□□□□□ -0.45
RAB40CQ96S21 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC12.27□□□□□ -0.45
RAB40CQ96S21 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC12.27□□□□□ -0.45
RAB40CQ96S21 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
RAB40CQ96S21 AC074044.1-201ENST00000609673 707 ntBASIC12.27□□□□□ -0.45
RAB40CQ96S21 AC026120.1-201ENST00000611536 926 ntBASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms