Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC18.11■□□□□ 0.49
CRAMP1Q96RY5 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
CRAMP1Q96RY5 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CRAMP1Q96RY5 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CRAMP1Q96RY5 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CRAMP1Q96RY5 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CRAMP1Q96RY5 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CRAMP1Q96RY5 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CRAMP1Q96RY5 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CRAMP1Q96RY5 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CRAMP1Q96RY5 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC18.11■□□□□ 0.49
CRAMP1Q96RY5 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC18.11■□□□□ 0.49
CRAMP1Q96RY5 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC18.11■□□□□ 0.49
CRAMP1Q96RY5 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CRAMP1Q96RY5 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CRAMP1Q96RY5 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CRAMP1Q96RY5 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
CRAMP1Q96RY5 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CRAMP1Q96RY5 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC18.11■□□□□ 0.49
CRAMP1Q96RY5 MRPL37P1-201ENST00000592451 1337 ntBASIC18.11■□□□□ 0.49
CRAMP1Q96RY5 CYP51A1P3-201ENST00000400072 1428 ntBASIC18.11■□□□□ 0.49
CRAMP1Q96RY5 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CRAMP1Q96RY5 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CRAMP1Q96RY5 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CRAMP1Q96RY5 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CRAMP1Q96RY5 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC18.11■□□□□ 0.49
CRAMP1Q96RY5 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CRAMP1Q96RY5 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CRAMP1Q96RY5 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CRAMP1Q96RY5 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CRAMP1Q96RY5 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.1■□□□□ 0.49
CRAMP1Q96RY5 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CRAMP1Q96RY5 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.1■□□□□ 0.49
CRAMP1Q96RY5 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CRAMP1Q96RY5 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CRAMP1Q96RY5 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CRAMP1Q96RY5 AC025271.4-201ENST00000621477 1726 ntBASIC18.1■□□□□ 0.49
CRAMP1Q96RY5 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC18.1■□□□□ 0.49
CRAMP1Q96RY5 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC18.1■□□□□ 0.49
CRAMP1Q96RY5 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CRAMP1Q96RY5 RN7SL81P-201ENST00000493781 261 ntBASIC18.1■□□□□ 0.49
CRAMP1Q96RY5 AC007326.1-201ENST00000604539 458 ntBASIC18.1■□□□□ 0.49
CRAMP1Q96RY5 AC087392.5-201ENST00000612517 489 ntBASIC18.1■□□□□ 0.49
CRAMP1Q96RY5 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC18.1■□□□□ 0.49
CRAMP1Q96RY5 MIR6858-201ENST00000620733 67 ntBASIC18.1■□□□□ 0.49
CRAMP1Q96RY5 AC025262.2-201ENST00000623975 1056 ntBASIC18.1■□□□□ 0.49
CRAMP1Q96RY5 CMC2-224ENST00000630396 481 ntTSL 5 BASIC18.1■□□□□ 0.49
CRAMP1Q96RY5 AP001184.1-201ENST00000637936 376 ntBASIC18.1■□□□□ 0.49
CRAMP1Q96RY5 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CRAMP1Q96RY5 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CRAMP1Q96RY5 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CRAMP1Q96RY5 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC18.1■□□□□ 0.49
CRAMP1Q96RY5 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CRAMP1Q96RY5 R3HDM2P2-201ENST00000401880 2116 ntBASIC18.1■□□□□ 0.49
CRAMP1Q96RY5 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CRAMP1Q96RY5 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CRAMP1Q96RY5 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CRAMP1Q96RY5 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CRAMP1Q96RY5 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CRAMP1Q96RY5 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CRAMP1Q96RY5 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CRAMP1Q96RY5 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CRAMP1Q96RY5 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CRAMP1Q96RY5 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CRAMP1Q96RY5 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CRAMP1Q96RY5 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CRAMP1Q96RY5 AC009093.10-201ENST00000641956 1442 ntBASIC18.09■□□□□ 0.49
CRAMP1Q96RY5 KRT8P28-201ENST00000433288 1390 ntBASIC18.09■□□□□ 0.49
CRAMP1Q96RY5 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CRAMP1Q96RY5 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CRAMP1Q96RY5 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC18.09■□□□□ 0.49
CRAMP1Q96RY5 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CRAMP1Q96RY5 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CRAMP1Q96RY5 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CRAMP1Q96RY5 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CRAMP1Q96RY5 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC18.09■□□□□ 0.49
CRAMP1Q96RY5 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CRAMP1Q96RY5 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC18.09■□□□□ 0.49
CRAMP1Q96RY5 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC18.09■□□□□ 0.49
CRAMP1Q96RY5 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC18.09■□□□□ 0.49
CRAMP1Q96RY5 AC084781.1-201ENST00000613737 656 ntBASIC18.09■□□□□ 0.49
CRAMP1Q96RY5 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CRAMP1Q96RY5 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CRAMP1Q96RY5 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
CRAMP1Q96RY5 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.09■□□□□ 0.49
CRAMP1Q96RY5 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.09■□□□□ 0.49
CRAMP1Q96RY5 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CRAMP1Q96RY5 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CRAMP1Q96RY5 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CRAMP1Q96RY5 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC18.09■□□□□ 0.49
CRAMP1Q96RY5 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CRAMP1Q96RY5 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CRAMP1Q96RY5 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CRAMP1Q96RY5 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CRAMP1Q96RY5 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CRAMP1Q96RY5 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CRAMP1Q96RY5 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.08■□□□□ 0.49
CRAMP1Q96RY5 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
CRAMP1Q96RY5 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC18.08■□□□□ 0.49
CRAMP1Q96RY5 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms