Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC3BQ96PB8 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LRRC3BQ96PB8 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC15.2■□□□□ 0.02
LRRC3BQ96PB8 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC15.2■□□□□ 0.02
LRRC3BQ96PB8 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC15.2■□□□□ 0.02
LRRC3BQ96PB8 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC3BQ96PB8 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.2■□□□□ 0.02
LRRC3BQ96PB8 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC3BQ96PB8 AC132872.4-202ENST00000622924 2756 ntBASIC15.2■□□□□ 0.02
LRRC3BQ96PB8 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LRRC3BQ96PB8 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC3BQ96PB8 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.2■□□□□ 0.02
LRRC3BQ96PB8 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC3BQ96PB8 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC3BQ96PB8 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC3BQ96PB8 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC3BQ96PB8 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC3BQ96PB8 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.2■□□□□ 0.02
LRRC3BQ96PB8 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRRC3BQ96PB8 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 LINC01165-201ENST00000445190 1623 ntBASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 AL035414.1-201ENST00000451327 857 ntBASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 STUB1-204ENST00000564370 875 ntTSL 2 BASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 AC015909.3-201ENST00000572855 1794 ntBASIC15.19■□□□□ 0.02
LRRC3BQ96PB8 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRC3BQ96PB8 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRRC3BQ96PB8 LINC01101-201ENST00000622953 1884 ntBASIC15.18■□□□□ 0.02
LRRC3BQ96PB8 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.18■□□□□ 0.02
LRRC3BQ96PB8 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRC3BQ96PB8 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRC3BQ96PB8 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRRC3BQ96PB8 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRRC3BQ96PB8 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRRC3BQ96PB8 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LRRC3BQ96PB8 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LRRC3BQ96PB8 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.18■□□□□ 0.02
LRRC3BQ96PB8 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRC3BQ96PB8 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRRC3BQ96PB8 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LRRC3BQ96PB8 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRC3BQ96PB8 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.18■□□□□ 0.02
LRRC3BQ96PB8 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRRC3BQ96PB8 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRRC3BQ96PB8 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
LRRC3BQ96PB8 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRRC3BQ96PB8 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRRC3BQ96PB8 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.18■□□□□ 0.02
LRRC3BQ96PB8 AC104784.1-201ENST00000473096 294 ntBASIC15.18■□□□□ 0.02
LRRC3BQ96PB8 RN7SL258P-201ENST00000478664 300 ntBASIC15.18■□□□□ 0.02
LRRC3BQ96PB8 RN7SL67P-201ENST00000492147 296 ntBASIC15.18■□□□□ 0.02
LRRC3BQ96PB8 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC15.18■□□□□ 0.02
LRRC3BQ96PB8 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
LRRC3BQ96PB8 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC15.18■□□□□ 0.02
LRRC3BQ96PB8 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC15.18■□□□□ 0.02
LRRC3BQ96PB8 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC15.18■□□□□ 0.02
LRRC3BQ96PB8 HPN-206ENST00000597419 1212 ntTSL 5 BASIC15.18■□□□□ 0.02
LRRC3BQ96PB8 AP003419.4-201ENST00000616071 517 ntBASIC15.18■□□□□ 0.02
LRRC3BQ96PB8 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.18■□□□□ 0.02
LRRC3BQ96PB8 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
LRRC3BQ96PB8 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms