Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.2■□□□□ 0.18
SNX27Q96L92 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.2■□□□□ 0.18
SNX27Q96L92 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC16.2■□□□□ 0.18
SNX27Q96L92 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC16.2■□□□□ 0.18
SNX27Q96L92 AL358472.3-201ENST00000608147 415 ntBASIC16.2■□□□□ 0.18
SNX27Q96L92 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.2■□□□□ 0.18
SNX27Q96L92 MIR6756-201ENST00000616240 63 ntBASIC16.2■□□□□ 0.18
SNX27Q96L92 AC002472.3-201ENST00000640124 621 ntBASIC16.2■□□□□ 0.18
SNX27Q96L92 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
SNX27Q96L92 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SNX27Q96L92 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SNX27Q96L92 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.2■□□□□ 0.18
SNX27Q96L92 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
SNX27Q96L92 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SNX27Q96L92 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.19■□□□□ 0.18
SNX27Q96L92 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.19■□□□□ 0.18
SNX27Q96L92 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SNX27Q96L92 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.19■□□□□ 0.18
SNX27Q96L92 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNX27Q96L92 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.19■□□□□ 0.18
SNX27Q96L92 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.19■□□□□ 0.18
SNX27Q96L92 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNX27Q96L92 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNX27Q96L92 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SNX27Q96L92 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SNX27Q96L92 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNX27Q96L92 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.19■□□□□ 0.18
SNX27Q96L92 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNX27Q96L92 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNX27Q96L92 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
SNX27Q96L92 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SNX27Q96L92 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNX27Q96L92 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNX27Q96L92 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNX27Q96L92 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SNX27Q96L92 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SNX27Q96L92 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC16.19■□□□□ 0.18
SNX27Q96L92 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC16.19■□□□□ 0.18
SNX27Q96L92 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNX27Q96L92 AC100850.1-201ENST00000506768 649 ntBASIC16.19■□□□□ 0.18
SNX27Q96L92 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC16.19■□□□□ 0.18
SNX27Q96L92 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.19■□□□□ 0.18
SNX27Q96L92 ACTG1P17-201ENST00000558391 1119 ntBASIC16.19■□□□□ 0.18
SNX27Q96L92 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC16.19■□□□□ 0.18
SNX27Q96L92 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SNX27Q96L92 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SNX27Q96L92 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SNX27Q96L92 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNX27Q96L92 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SNX27Q96L92 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNX27Q96L92 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNX27Q96L92 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.19■□□□□ 0.18
SNX27Q96L92 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
SNX27Q96L92 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SNX27Q96L92 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.19■□□□□ 0.18
SNX27Q96L92 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNX27Q96L92 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SNX27Q96L92 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.19■□□□□ 0.18
SNX27Q96L92 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.19■□□□□ 0.18
SNX27Q96L92 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SNX27Q96L92 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.19■□□□□ 0.18
SNX27Q96L92 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNX27Q96L92 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SNX27Q96L92 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNX27Q96L92 AGAP7P-201ENST00000582299 2062 ntBASIC16.18■□□□□ 0.18
SNX27Q96L92 AC023157.3-201ENST00000619086 2088 ntBASIC16.18■□□□□ 0.18
SNX27Q96L92 AGAP14-201ENST00000624701 2060 ntBASIC16.18■□□□□ 0.18
SNX27Q96L92 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNX27Q96L92 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SNX27Q96L92 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.18■□□□□ 0.18
SNX27Q96L92 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SNX27Q96L92 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SNX27Q96L92 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SNX27Q96L92 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.18■□□□□ 0.18
SNX27Q96L92 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNX27Q96L92 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNX27Q96L92 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SNX27Q96L92 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SNX27Q96L92 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SNX27Q96L92 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.18■□□□□ 0.18
SNX27Q96L92 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNX27Q96L92 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.18■□□□□ 0.18
SNX27Q96L92 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SNX27Q96L92 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.18■□□□□ 0.18
SNX27Q96L92 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
SNX27Q96L92 AC091046.1-201ENST00000331871 207 ntBASIC16.18■□□□□ 0.18
SNX27Q96L92 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.18■□□□□ 0.18
SNX27Q96L92 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC16.18■□□□□ 0.18
SNX27Q96L92 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SNX27Q96L92 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.18■□□□□ 0.18
SNX27Q96L92 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC16.18■□□□□ 0.18
SNX27Q96L92 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.18■□□□□ 0.18
SNX27Q96L92 AC104982.3-201ENST00000581995 514 ntBASIC16.18■□□□□ 0.18
SNX27Q96L92 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC16.18■□□□□ 0.18
SNX27Q96L92 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC16.18■□□□□ 0.18
SNX27Q96L92 AL008638.5-201ENST00000623814 1298 ntBASIC16.18■□□□□ 0.18
SNX27Q96L92 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.18■□□□□ 0.18
SNX27Q96L92 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC16.18■□□□□ 0.18
SNX27Q96L92 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNX27Q96L92 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms